PARSEC - Département GA INRAE

Documentation
French (FR)

English (EN)

Software Year : 2025

PARSEC

(1, 2) , (1)

1
2

Cervin Guyomar

Function : Author
PersonId : 745075
IdHAL : cervin-guyomar
ORCID : 0000-0003-2707-2541

Génétique Physiologie et Systèmes d'Elevage

Système d'Information des GENomes des Animaux d'Elevage

Bertrand Servin

Function : Management
PersonId : 183571
IdHAL : bertrand-servin
ORCID : 0000-0001-5141-0913
IdRef : 079704646

Génétique Physiologie et Systèmes d'Elevage

Abstract

PARSEC is a bioinformatics pipeline designed to genotype large populations using low coverage sequencing data

Keywords

Genotyping by sequencing Low coverage sequencing Nextflow Genotype imputation

Domains

Bioinformatics [q-bio.QM] Genetics

Cervin Guyomar : Connect in order to contact the contributor

https://hal.inrae.fr/hal-04877682

Submitted on : Thursday, January 9, 2025-4:58:13 PM

Last modification on : Thursday, January 16, 2025-3:34:41 AM

Dates and versions

hal-04877682 , version 1 (09-01-2025)

Identifiers

HAL Id : hal-04877682 , version 1
SWHID : swh:1:dir:19771d312143bd56d9bafaf23abe66e26bf5216d;origin=https://github.com/cguyomar/PARSEC;visit=swh:1:snp:9ab8a5f497792a7fb635122df8ee1033dece5193;anchor=swh:1:rev:c4a9a0f518e2892904628e80222657fc6612f1f8

version :
softwareLicence : MIT License
programmingLanguage : Nextflow
codeRepository : https://github.com/cguyomar/PARSEC/

Cite

Cervin Guyomar, Bertrand Servin. PARSEC. 2025, ⟨swh:1:dir:19771d312143bd56d9bafaf23abe66e26bf5216d;origin=https://github.com/cguyomar/PARSEC;visit=swh:1:snp:9ab8a5f497792a7fb635122df8ee1033dece5193;anchor=swh:1:rev:c4a9a0f518e2892904628e80222657fc6612f1f8⟩. ⟨hal-04877682⟩

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Collections

INRAE GENETIQUE_ANIMALE GENPHYSE INRAEOCCITANIETOULOUSE TOULOUSE-INP UT3-TOULOUSEINP ENVT EIPURPAN

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