,
,
,
, Hunan2-3 IND-Matsyapuri-3 IND-Matsyapuri-9
, Hubei-3
,
,
,
,
,
, Hubei-4
,
,
,
Plant-insect interactions: molecular approaches to insect resistance, Curr. Opin. Biotechnol, vol.15, pp.155-161, 2004. ,
IRAC: mode of action classification and insecticide resistance management. Pestic, Biochem. Physiol, vol.121, pp.122-128, 2015. ,
, Arthropod Pesticide Resistance Database, 2017.
Population dynamics of Spodoptera litura (Lepidoptera: Noctuidae) on Bt cotton in the Yangtze River Valley of China, Environ. Entomol, vol.37, pp.1043-1048, 2008. ,
Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges, Sci. Rep, 2017. ,
URL : https://hal.archives-ouvertes.fr/hal-01633879
Creating a honey bee consensus gene set, Genome Biol, vol.8, p.13, 2007. ,
The genome of a lepidopteran model insect, the silkworm Bombyx mori, Insect Biochem. Mol. Biol, vol.38, pp.1036-1045, 2008. ,
A heterozygous moth genome provides insights into herbivory and detoxification, Nat. Genet, vol.45, pp.220-225, 2013. ,
The monarch butterfly genome yields insights into long-distance migration, Cell, vol.147, pp.1171-1185, 2011. ,
Comprehensive gene and taxon coverage elucidates radiation patterns in moths and butterflies, Proc. Biol. Sci, vol.277, pp.2839-2848, 2010. ,
Butterfly genome reveals promiscuous exchange of mimicry adaptations among species, Nature, vol.487, pp.94-98, 2012. ,
The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera, Nat. Commun, vol.5, p.4737, 2014. ,
Multifaceted biological insights from a draft genome sequence of the tobacco hornworm moth, Manduca sexta, Insect Biochem. Mol. Bio, vol.76, pp.118-147, 2016. ,
URL : https://hal.archives-ouvertes.fr/hal-01988455
Female behaviour drives expression and evolution of gustatory receptors in butterflies, PLoS Genet, vol.9, p.1003620, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-01190382
Drosophila chemoreceptor gene evolution: selection, specialization and genome size, Mol. Ecol, vol.17, pp.1648-1657, 2008. ,
Expression map of a complete set of gustatory receptor genes in chemosensory organs of Bombyx mori, Insect Biochem. Mol. Biol, vol.82, pp.74-82, 2017. ,
URL : https://hal.archives-ouvertes.fr/hal-01602615
Evolution of the sugar receptors in insects, Evol. Biol, vol.9, p.41, 2009. ,
Evolution of the gene lineage encoding the carbon dioxide receptor in insects, J. Insect Sci, vol.9, p.19, 2009. ,
A reference gene set for chemosensory receptor genes of Manduca sexta, Insect Biochem. Mol. Biol, vol.66, pp.51-63, 2015. ,
Topological and functional characterization of an insect gustatory receptor, PLoS ONE, vol.6, p.24111, 2011. ,
Expansion of a bitter taste receptor family in a polyphagous insect herbivore, Sci. Rep, vol.6, p.23666, 2016. ,
Molecular mechanisms of metabolic resistance to synthetic and natural xenobiotics, Annu. Rev. Entomol, vol.52, pp.231-253, 2007. ,
The ABC gene family in arthropods: comparative genomics and role in insecticide transport and resistance, Insect Biochem. Mol. Biol, vol.45, pp.89-110, 2014. ,
Genome-wide analysis of the ATP-binding cassette (ABC) transporter gene family in the silkworm, Bombyx mori, Mol. Biol. Rep, vol.39, pp.7281-7291, 2012. ,
Identification and characterization of CYP9A40 from the tobacco cutworm moth (Spodoptera litura), a cytochrome P450 gene induced by plant allelochemicals and insecticides, Int. J. Mol. Sci, vol.16, pp.22606-22620, 2015. ,
Isolation and expression analysis of CYP9A11 and cytochrome P450 reductase gene in the beet armyworm (Lepidoptera: Noctuidae), J. Insect Sci, vol.15, p.122, 2015. ,
Identification of a novel cytochrome P450 CYP321B1 gene from tobacco cutworm (Spodoptera litura) and RNA interference to evaluate its role in commonly used insecticides, Insect Sci, vol.24, pp.235-247, 2017. ,
A deficit of detoxification enzymes: pesticide sensitivity and environmental response in the honeybee, Insect Mol. Biol, vol.15, pp.615-636, 2006. ,
Mosquito carboxylesterases: a review of the molecular biology and biochemistry of a major insecticide resistance mechanism, Med. Vet. Entomol, vol.12, pp.1-12, 1998. ,
Genomic and phylogenetic analysis of insect carboxyl/cholinesterase genes, J. Pestic. Sci, vol.35, pp.310-314, 2010. ,
Bacillus thuringiensis: A story of a successful bioinsecticide, Insect Biochem. Mol. Biol, vol.41, pp.423-431, 2011. ,
Single amino acid mutation in an ATP-binding cassette transporter gene causes resistance to Bt toxin Cry1Ab in the silkworm, Bombyx mori, Proc. Natl Acad. Sci. USA, vol.109, pp.1591-1598, 2012. ,
Insect resistance to Bacillus thuringiensis toxin Cry2Ab is conferred by mutations in an ABC transporter subfamily A protein, PLoS Genet, vol.11, p.1005534, 2015. ,
Inference of population structure using multilocus genotype data, Genetics, vol.155, pp.945-959, 2000. ,
DNA sequence variation of the tobacco cutworm, Spodoptera litura (Lepidoptera: Noctuidae), determined by mitochondrial A+ T-rich region and nuclear ITS2 sequences, Biochem. Genet, vol.49, pp.760-787, 2011. ,
Flight capability and fatty acid level in triacylglycerol of long-distance migratory adults of the common cutworm, Spodoptera litura, Zoolog. Sci, vol.21, pp.181-188, 2004. ,
Overseas migration of the common cutworm, Spodoptera litura (Lepidoptera: Noctuidae), from May to mid-July in East Asia, vol.48, pp.141-140, 2013. ,
Future change of Asian-Australian monsoon under RCP 4.5 anthropogenic warming scenario, Clim. Dynam, vol.42, pp.83-100, 2014. ,
Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data, PLoS Genet, vol.5, p.1000695, 2009. ,
Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis, Genetics, vol.167, pp.747-760, 2004. ,
High-quality draft assemblies of mammalian genomes from massively parallel sequence data, Proc. Natl Acad. Sci. USA, vol.108, pp.1513-1518, 2011. ,
De novo assembly of human genomes with massively parallel short read sequencing, Genome Res, vol.20, pp.265-272, 2010. ,
SOAP2: an improved ultrafast tool for short read alignment, Bioinformatics, vol.25, pp.1966-1967, 2009. ,
AUGUSTUS: a web server for gene finding in eukaryotes, Nucleic Acids Res, vol.32, pp.309-312, 2004. ,
Gene finding in novel genomes, Bioinformatics, vol.5, p.59, 2004. ,
, Genome Res, vol.14, pp.988-995, 2004.
TopHat: discovering splice junctions with RNA-Seq, Bioinformatics, vol.25, pp.1105-1111, 2009. ,
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks, Nat. Protoc, vol.7, pp.562-578, 2012. ,
The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000, Nucleic Acids Res, vol.28, pp.45-48, 2000. ,
KEGG: kyoto encyclopedia of genes and genomes, Nucleic Acids Res, vol.28, pp.27-30, 2000. ,
Using the Basic Local Alignment Search Tool (BLAST), CSH Protoc, p.17, 2007. ,
InterPro and InterProScan: tools for protein sequence classification and comparison, Methods Mol. Biol, vol.396, pp.59-70, 2007. ,
Gene Ontology: tool for the unification of biology, Nat. Genet, vol.25, pp.25-29, 2000. ,
Automated de novo identification of repeat sequence families in sequenced genomes, Genome Res, vol.12, pp.1269-1276, 2002. ,
De novo identification of repeat families in large genomes, Bioinformatics, vol.21, pp.351-358, 2005. ,
TreeFam: a curated database of phylogenetic trees of animal gene families, Nucleic Acids Res, vol.34, pp.572-580, 2006. ,
MUSCLE: multiple sequence alignment with high accuracy and high throughput, Nucleic Acids Res, vol.32, pp.1792-1797, 2004. ,
MODELTEST: testing the model of DNA substitution, Bioinformatics, vol.14, pp.817-818, 1998. ,
MRBAYES: Bayesian inference of phylogenetic trees, Bioinformatics, vol.17, pp.754-755, 2001. ,
PAML 4: phylogenetic analysis by maximum likelihood, Mol. Biol. Evol, vol.24, pp.1586-1591, 2007. ,
The timing of eukaryotic evolution: does a relaxed molecular clock reconcile proteins and fossils?, Proc. Natl Acad. Sci. USA, vol.101, pp.15386-15391, 2004. ,
URL : https://hal.archives-ouvertes.fr/halsde-00193035
Paleontological evidence to date the tree of life, Mol. Biol. Evol, vol.24, pp.26-53, 2007. ,
CAFE: a computational tool for the study of gene family evolution, Bioinformatics, vol.22, pp.1269-1271, 2006. ,
Linkage mapping and comparative genomics using next-generation RAD sequencing of a non-model organism, PLoS ONE, vol.6, p.19315, 2011. ,
Multipoint maximum likelihood mapping in a full-sib family of an outbreeding species, Genet. Res, vol.93, pp.343-349, 2011. ,
KAIKObase: an integrated silkworm genome database and data mining tool, Genomics, vol.10, p.486, 2009. ,
Outbred genome sequencing and CRISPR/Cas9 gene editing in butterflies, Nat. Commun, vol.6, p.8212, 2015. ,
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity, Nucleic Acids Res, vol.40, p.49, 2012. ,
HMMER web server: interactive sequence similarity searching, Nucleic Acids Res, vol.39, pp.29-37, 2011. ,
Scipio: using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related species, Bioinformatics, vol.9, p.278, 2008. ,
Automated generation of heuristics for biological sequence comparison, Bioinformatics, vol.6, p.31, 2005. ,
Cytochromes P450: a success story, Genome Biol, vol.1, pp.1-9, 2000. ,
Origins of P450 diversity, Phil. Trans. R. Soc. Lond. B Biol. Sci, vol.368, p.20120428, 2013. ,
MAFFT multiple sequence alignment software version 7: improvements in performance and usability, Mol. Biol. Evol, vol.30, pp.772-780, 2013. ,
Molecular Evolutionary Genetics Analysis version 6.0, Mol. Biol. Evol, vol.30, pp.2725-2729, 2013. ,
Dating of the human-ape splitting by a molecular clock of mitochondrial DNA, J. Mol. Evol, vol.22, pp.160-174, 1985. ,
An improved general amino acid replacement matrix, Mol. Biol. Evol, vol.25, pp.1307-1320, 2008. ,
URL : https://hal.archives-ouvertes.fr/lirmm-00324106
Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods, J. Mol. Evol, vol.39, pp.306-314, 1994. ,
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies, Bioinformatics, vol.30, pp.1312-1313, 2014. ,
Improved bootstrap confidence limits in large-scale phylogenies, with an example from Neo-Astragalus (Leguminosae), Syst. Biol, vol.49, pp.671-685, 2000. ,
A rapid bootstrap algorithm for the RAxML Web servers, Syst. Biol, vol.57, pp.758-771, 2008. ,
Cleavage of structural proteins during the assembly of the head of bacteriophage T4, Nature, vol.227, pp.680-685, 1970. ,
Glutathione S-transferases: the first enzymatic step in mercapturic acid formation, J. Biol. Chem, vol.249, pp.7130-7139, 1974. ,
The variant call format and VCFtools, Bioinformatics, vol.27, pp.2156-2158, 2011. ,
Estimating F-statistics for the analysis of population structure, Evol. Int. J. Organic Evol, vol.38, pp.1358-1370, 1984. ,
Generating samples under a Wright-Fisher neutral model of genetic variation, Bioinformatics, vol.18, pp.337-338, 2002. ,
fastSTRUCTURE: variational inference of population structure in large SNP data sets, Genetics, vol.197, pp.573-589, 2014. ,
The genetics of monarch butterfly migration and warning colouration, Nature, vol.514, pp.317-321, 2014. ,
Direct estimation of per nucleotide and genomic deleterious mutation rates in Drosophila, Nature, vol.445, pp.82-85, 2007. ,
The i5K Initiative: advancing arthropod genomics for knowledge, human health, agriculture, and the environment, J. Hered, vol.104, pp.595-600, 2013. ,