Full-length de novo assembly of RNA-seq data in pea (Pisum sativum L.) provides a gene expression atlas and gives insights into root nodulation in this species, Plant J, vol.84, pp.1-19, 2015. ,
Controlling the false discovery rate: a practical and powerful approach to multiple testing, J. R. Statist. Soc. B, vol.57, pp.289-300, 1995. ,
Localization of AtROP4 and AtROP6 and interaction with the guanine nucleotide dissociation inhibitor AtRhoGDI1 from Arabidopsis, Plant Mol. Biol, vol.42, pp.515-530, 2000. ,
High-density genome-wide association mapping implicates an F-box encoding gene in Medicago truncatula resistance to Aphanomyces euteiches, New Phytologist, vol.201, pp.1328-1342, 2014. ,
URL : https://hal.archives-ouvertes.fr/hal-01208691
Co-inoculation of a pea core-collection with diverse rhizobial strains shows competitiveness for nodulation and efficiency of nitrogen fixation are distinct traits in the interaction, Front. Plant Sci, vol.8, p.2249, 2018. ,
Genetic dissection of nitrogen nutrition in pea through a QTL approach of root, nodule, and shoot variability, Theor. Appl. Genet, vol.121, pp.71-86, 2010. ,
SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population, BMC Genomics, vol.17, p.121, 2016. ,
URL : https://hal.archives-ouvertes.fr/hal-01275696
Impacts of plant growth and architecture on pathogen processes and their consequences for epidemic behaviour, Eur. J. Plant Pathol, vol.135, pp.479-497, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-00908549
Second-generation PLINK: rising to the challenge of larger and richer datasets, Gigascience, vol.4, p.7, 2015. ,
DOI : 10.1186/s13742-015-0047-8
URL : https://academic.oup.com/gigascience/article-pdf/4/1/s13742-015-0047-8/25512027/13742_2015_article_47.pdf
Fusarium root rot incidence and root system architecture in grafted common bean lines, Plant Soil, vol.300, pp.233-244, 2007. ,
DOI : 10.1007/s11104-007-9408-0
Genome-wide association mapping of partial resistance to Aphanomyces euteiches in pea, BMC Genomics, vol.17, p.124, 2016. ,
URL : https://hal.archives-ouvertes.fr/hal-01378597
Resistance to melon vine decline derived from Cucumis melo ssp. agrestis: genetic analysis of root structure and root response, Plant Breed, vol.123, pp.66-72, 2004. ,
DOI : 10.1046/j.1439-0523.2003.00944.x
Natural variation of Medicago truncatula resistance to Aphanomyces euteiches, Eur. J. Plant Pathol, vol.135, pp.831-843, 2013. ,
Partial resistance of Medicago truncatula to Aphanomyces euteiches is associated with protection of the root stele and is controlled by a major QTL rich in proteasome-related genes, Mol. Plant Microbe Int, vol.22, pp.1043-1055, 2009. ,
Challenges and opportunities for quantifying roots and rhizosphere interactions through imaging and image analysis, Plant Cell Environ, vol.38, pp.1213-1232, 2015. ,
Breeding annual grain legumes for sustainable agriculture: new methods to approach complex traits and target new cultivar ideotypes, Crit. Rev. Plant Sci, vol.34, pp.381-411, 2015. ,
DOI : 10.1080/07352689.2014.898469
URL : http://oar.icrisat.org/9123/1/CRPS_34_1-3_381-411_2015.pdf
Polygalacturonase inhibiting proteins: players in plant innate immunity?, Trends Plant Sci, vol.11, pp.65-70, 2006. ,
DOI : 10.1016/j.tplants.2005.12.005
DETERMINATE and LATE FLOWERING are two TERMINAL FLOWER1/CENTRORADIALIS homologs that control two distinct phases of flowering initiation and development in pea, Plant Cell, vol.15, pp.2742-2754, 2003. ,
Root rot disease of legumes caused by Aphanomyces euteiches, Mol. Plant Pathol, vol.8, pp.539-548, 2007. ,
Association mapping in crop plants: opportunities and challenges, Adv. Genet, vol.85, pp.109-147, 2014. ,
DOI : 10.1016/b978-0-12-800271-1.00002-0
Mapping Fusarium solani and Aphanomyces euteiches root rot resistance and root architecture Quantitative Trait Loci in common bean, Crop Sci, vol.55, pp.1969-1977, 2015. ,
DOI : 10.2135/cropsci2014.11.0805
URL : https://dl.sciencesocieties.org/publications/cs/pdfs/55/5/1969
New consistent QTL in pea associated with partial resistance to Aphanomyces euteiches in multiple French and American environments, Theor. Appl. Genet, vol.123, pp.261-281, 2011. ,
QTL meta-analysis provides a comprehensive view of loci controlling partial resistance to Aphanomyces euteiches in four sources of resistance in pea, BMC Plant Biol, vol.13, p.45, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-01208633
Wheat mitogenactivated protein kinase gene TaMPK4 improves plant tolerance to multiple stresses through modifying root growth, ROS metabolism, and nutrient acquisitions, Plant Cell Rep, vol.34, pp.2081-2097, 2015. ,
DOI : 10.1007/s00299-015-1853-2
Plant root growth, architecture and function, Plant Soil, vol.321, pp.153-187, 2009. ,
Root characteristics in pea in relation to compaction and Fusarium root rot, Plant Dis, vol.85, pp.936-940, 2001. ,
The CRE1 cytokinin pathway is differentially recruited depending on Medicago truncatula root environments and negatively regulates resistance to a pathogen, PLoS ONE, vol.10, p.116819, 2015. ,
Validation of QTL for resistance to Aphanomyces euteiches in different pea genetic backgrounds using near-isogenic lines, Theor. Appl. Genet, vol.128, pp.2273-2288, 2015. ,
URL : https://hal.archives-ouvertes.fr/hal-01236551
, lsmeans: Least-Squares Means, 2015.
GAPIT: genome association and prediction integrated tool, Bioinformatics, vol.28, pp.2397-2399, 2012. ,
Intrinsic and environmental response pathways that regulate root system architecture, Plant Cell Environ, vol.28, pp.67-77, 2005. ,
Using crop canopy modification to manage plant diseases, Eur. J. Plant Pathol, vol.135, pp.581-593, 2013. ,
Variation for seedling root architecture in the core collection of pea germplasm, Crop Sci, vol.45, pp.1758-1763, 2005. ,
Arabidopsis thaliana Rop GTPases are localized to tips of root hairs and control polar growth, EMBO J, vol.20, pp.2779-2788, 2001. ,
Development of an efficient screening test for pea resistance to Aphanomyces euteiches, 4th European Conference On Grain Legumes, pp.272-273, 2001. ,
Mapping of QTL associated with Fusarium root rot resistance and root architecture traits in black beans, Euphytica, vol.212, pp.51-63, 2016. ,
Crop architecture and crop tolerance to fungal diseases and insect herbivory. Mechanisms to limit crop losses, Eur. J. Plant Pathol, vol.135, pp.561-580, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-01000864
Dissecting quantitative trait variation in the resequencing era: complementarity of bi-parental, multi-parental and association panels, Plant Sci, vol.242, pp.120-130, 2016. ,
Consistent quantitative trait loci in pea for partial resistance to Aphanomyces euteiches isolates from the United States and France, Phytopathology, vol.95, pp.1287-1293, 2005. ,
Quantitative trait loci for partial resistance to Aphanomyces root rot in pea, Theor. Appl. Genet, vol.106, pp.28-39, 2002. ,
Shades of gray: the world of quantitative disease resistance, Trends Plant Sci, vol.14, pp.21-29, 2009. ,
PLINK: a tool set for whole-genome association and populationbased linkage analyses, Am. J. Hum. Genet, vol.81, pp.559-575, 2007. ,
MAP kinase cascades in Arabidopsis innate immunity, Front. Plant Sci, vol.3, p.169, 2012. ,
R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, 2014. ,
psych: Procedures for Psychological, Psychometris and Personality Research, 2015. ,
Effect of pea canopy architecture on microclimate and consequences on ascochyta blight infection under field conditions, Eur. J. Plant Pathol, vol.135, pp.509-524, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-01208599
Assessing root traits associated with root rot resistance in common bean, Field Crops Res, vol.86, pp.147-156, 2004. ,
scrime: Analysis of High-Dimensional Categorical Data Such as SNP data, 2013. ,
An efficient multi-locus mixed-model approach for genomewide association studies in structured populations, Nat. Genet, vol.44, 2012. ,
URL : https://hal.archives-ouvertes.fr/hal-01267792
Root traits play a role in integrated management of Fusarium root rot in snap beans, HortScience, vol.38, pp.187-191, 2003. ,
BioMercator V3: an upgrade of genetic map compilation and quantitative trait loci meta-analysis algorithms, Bioinformatics, vol.28, pp.2082-2083, 2012. ,
Development of two major resources for pea genomics: the GenoPea 13.2K SNP Array and a high-density, high-resolution consensus genetic map, Plant J, vol.84, pp.1257-1273, 2015. ,
URL : https://hal.archives-ouvertes.fr/hal-01509039
Molecular, cellular, and physiological responses to phosphatidic acid formation in plants, J. Exp. Bot, vol.62, pp.2349-2361, 2011. ,
Current knowledge on plant/canopy architectural traits that reduce the expression and development of epidemics, Eur. J. Plant Pathol, vol.135, pp.471-478, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-01000429
MapChart: software for the graphical presentation of linkage maps and QTLs, J. Heredity, vol.93, pp.77-78, 2002. ,
Identification of genes affecting root mass and root/shoot ratio in a JI 1794 x 'Slow' RIL population, Pisum Genet, vol.34, pp.28-31, 2002. ,
Specific behaviour of French Aphanomyces euteiches drechs. Populations for virulence and aggressiveness on pea, related to isolates from Europe, America and New Zealand, Eur. J. Plant Pathol, vol.107, pp.919-929, 2001. ,