, FR -bernier@mnhn.fr; ponge@mnhn.fr 4. UMR Agroécologie, Agrosup Dijon

, Università degli Studi di Padova, IT -cristian

, École supérieure des Arts Décoratifs de Strasbourg, FR -karien@karinebonneval.com 7. IRSTEA -Centre de Grenoble

, IT -raffaello.giannini@unifi.it 10. Garden Writers of America, US -jeff@gardener.com 11. Università degli Studi di Parma, IT -cristina

, Udine, ITc.micheloni@aiab.it 13. UMR 1114 EMMAH, INRA, Avignon Université, 84914, Avignon, Franceceline.pelosi@inra.fr 14, Associazione Italiana per l'Agricoltura Biologica (AIAB-FVG)

, Wigwam Network, IT-comunicazione@wigwam

C. Azienda-agricola, Pieve di Soligo, Treviso, IT -gianni@colbelwine.com 18. PAN Studio Associato, Merano, IT -mauro

M. G. Paoletti, B. R. Stinner, D. Stinner, S. Barbieri, A. Crosato et al., Casi concreti di agricoltura sostenibile: riflessioni da un viaggio in USA, Veneto Agricoltura, p.12, 1990.

M. G. Paoletti, B. R. Stinner, and G. G. Lorenzoni, Agricultural Ecology and Environment, Proceedings of an International Symposium on Agricultural Ecology and Environment, vol.636, pp.0-444, 1988.

M. G. Paoletti and D. Pimentel, Biotic Diversity in Agroecosystems. Paper from symposium on Agroecology and Conservation Issues in Tropical and Temperate Regions, vol.356, pp.0-444, 1990.

T. Gomiero, D. Pimentel, and M. G. Paoletti, Environmental Impact of Different Agricultural Management Practices: Conventional vs. Organic Agriculture, Critical Reviews in Plant Sciences, vol.30, issue.1-2, pp.95-124, 2011.

S. Fusaro, F. Gavinelli, D. Sommaggio, and M. G. Paoletti, Higher Efficiency in Organic than in Conventional Management of Biological Control in Horticultural Crops in North-Eastern Italy, Biological Control, vol.97, 2016.

L. Luisa, M. Arndorfer, K. Balazs, P. Dennis, T. Dyman et al.,

A. Aires, R. Carvalho, E. A. Rosa, and M. J. Saavedra, Effects of agriculture production systems on nitrate and nitrite accumulation on baby-leaf salads, Food Sci. Nutr, vol.1, issue.1, pp.3-7, 2013.

A. Amr and N. Hadidi, Effect of cultivar and harvest date on nitrate (NO3) and nitrite (NO2) content of selected vegetables grown under open field and greenhouse conditions in Jordan, J. Food Compos. Anal, vol.14, pp.59-67, 2001.

V. P. Aneja, W. H. Schlesinger, and J. W. Erisman, Effects of agriculture upon the air quality and climate: research policy, and regulations, Environ. Sci. Technol, vol.43, pp.4234-4240, 2009.

M. Annabi, S. Houot, . Francou, C. Poitrenaud, M. Bissonnais et al., Soil aggregate stability improvement with urban composts of different maturities, Soil Sci. Soc. Am. J, vol.71, pp.413-423, 2007.

D. K. Asami, Y. J. Hong, D. M. Barrett, and A. E. Mitchell, Comparison of the total phenolic and ascorbic acid content of freeze-dried and air-dried marionberry, strawberry, and corn grown using conventional, organic, and sustainable agricultural practices, J. Agric. Food Chem, vol.51, pp.1237-1241, 2003.

M. Asensi, A. Ortega, S. Mena, F. Feddi, and J. M. Estrela, Natural polyphenols in cancer therapy, Crit. Rev. Clin. Lab. Sci, vol.48, pp.197-216, 2011.

E. Ayres, K. M. Dromph, and R. D. Bardgett, Do plant species encourage soil biota that specialise in the rapid decomposition of their litter?, Soil Biol. Biochem, vol.38, pp.183-186, 2006.

T. Bøhn, M. Cuhra, T. Traavik, M. Sanden, J. Fagan et al., Compositional differences in soybeans on the market: glyphosate accumulates in Roundup Ready GM soybeans, Food Chem, vol.153, pp.207-215, 2014.

B. P. Baker, C. M. Benbrook, I. Groth, E. Benbrook, and K. L. , Pesticide residues in conventional, integrated pest management (IPM)-grown and organic foods: insights from three US data sets, Food Addit. Contamin, vol.19, pp.427-446, 2002.

M. Balabane, C. Chenu, F. Bureau, T. Decaens, M. Akpa et al., Restauration de fonctions et propriétés des sols de grande culture intensive, Effets de systèmes de culture alternatifs sur les matières organiques et la structure des sols limoneux et approche du rôle fonctionnel de la diversité biologique des sols (Dmos, 2005.

J. Balesdent, E. Besnard, D. Arrouays, and C. Chenu, The dynamics of carbon in particlesize fractions of soil in a forest-cultivation sequence, Plant Soil, vol.201, pp.49-57, 1998.

J. Balesdent, C. Chenu, and M. Balabane, Relationship of soil organic matter dynamics to physical protection and tillage, Soil Tillage Res, vol.53, pp.107-112, 2000.

T. Hernández, C. Chocano, J. L. Moreno, and C. García, Towards a more sustainable fertilization: combined use of compost and inorganic fertilization for tomato culti-vation, 2014.

, Agric. Ecosyst. Environ, vol.196, pp.178-184

C. Hoefkens, I. Sioen, K. Baert, B. De-meulenaer, S. De-henauw et al., Consuming organic versus conventional vegetables: the effect on nutrient and contaminant intakes, Food Chem. Toxicol, vol.48, pp.3058-3066, 2010.

D. G. Hole, A. J. Perkins, J. D. Wilson, I. H. Alexander, P. V. Grice et al., Does organic farming benefit biodiversity?, Biol. Conserv, vol.122, pp.113-130, 2005.

E. A. Holland and D. C. Coleman, Litter placement effects on microbial and organic matter dynamics in an agroecosystem, Ecology, vol.68, pp.425-433, 1987.

E. Juárez and M. Diaz, Exploring the causes of high biodiversity of Iberian dehesas: the importance of wood pastures and marginal habitats, Agrofor. Syst, vol.90, issue.1, p.87, 2016.

S. Kamau, E. Barrios, N. K. Karanja, F. O. Ayuke, and J. Lehmann, Soil macrofauna abundance under dominant tree species increases along a soil degradation gradient, Soil Biol. Biochem, vol.112, pp.35-46, 2017.

A. M. Keith and D. A. Robinson, Earthworms as natural capital: ecosystem service providers in agricultural soils, Econ. J, vol.2, pp.91-99, 2012.

M. Kimura and D. B. Rodriguez-amaya, Carotenoid composition of hydroponic leafy vegetables, J. Agric. Food Chem, vol.51, pp.2603-2607, 2003.

D. Knight, P. W. Elliott, J. M. Anderson, and D. Scholefield, The role of earthworms in managed, permanent pastures in Devon, England. Soil Biol. Biochem, vol.24, pp.1511-1517, 1992.

A. Komarov, O. Chertov, S. Bykhovets, C. Shaw, M. Nadporozhskaya et al., Romul-Hum: a model of soil organic matter formation coupling with soil biota activity I. Problem formulation, model description, and testing, Ecol. Modell, vol.345, pp.113-124, 2017.

J. Kozdrój and J. D. Van-elsas, Response of the bacterial community to root exudates in soil polluted with heavy metals assessed by molecular and cultural approaches, Soil Biol. Biochem, vol.32, pp.1405-1417, 2000.

C. Kremen and A. Miles, Ecosystem services in biologically diversified versus conventional farming systems: benefits, externalities and trade-offs, Ecol. Soc, vol.17, issue.4, 2012.

D. Kusche, Organic milk and nutritional benefits for the consumer, Org. Food Qual. Health Newslett, issue.1, 2009.

L. Barbosa, G. Almeida-gadelha, F. D. Kublik, N. Proctor, A. Reichelm et al., Comparison of land, water, and energy requirements of lettuce grown using hydroponic vs conventional agricultural methods, Int. J. Environ. Res. Public Health, vol.12, pp.6879-6891, 2015.

D. Lairon, Nutritional quality and safety of organic food. A review, Agron. Sustain. Dev (Epub). www.agronomy-journal.org, 2009.
URL : https://hal.archives-ouvertes.fr/hal-00886513

R. Lal, Restoring Soil Quality to Mitigate Soil Degradation, pp.5875-5895, 2015.

D. A. Landis, Designing agricultural landscapes for biodiversity-based ecosystem services, Basic Appl. Ecol, vol.18, pp.1-12, 2017.

M. Lange, N. Eisenhauer, C. A. Sierra, H. Bessler, C. Engels et al., Plant diversity increases soil microbial activity and soil carbon storage, Nat. Commun, vol.6, 2015.

P. Lavelle and C. Gilot, Priming effects of macroorganisms on microflora: a key process of soil function?, Beyond the Biomass, pp.176-181, 1994.

P. Lavelle, Faunal activities and soil processes: adaptive strategies that determine ecosystem function, Adv. Ecol. Res, vol.27, pp.93-132, 1997.

F. Magkos, F. Arvaniti, and A. Zampelas, Organic food: nutritious food or food for thought? A review of the evidence, Int. J. Food Sci. Nutr, vol.54, issue.5, pp.357-371, 2003.

F. Magkos, F. Arvaniti, and A. Zampelas, Organic food: buying more safety or just peace of mind? a critical review of the literature, Crit. Rev. Food Sci. Nutr, vol.46, pp.23-56, 2006.

M. Mazzoncini, D. Antichi, N. Silvestri, G. Ciantelli, and C. Sgherri, Organically vs conventionally grown winter wheat: effects on grain yield, technological quality, and on phenolic composition and antioxidant properties of bran and refined flour, Food Chem, vol.175, pp.445-451, 2015.

J. M. Melillo, P. A. Steudler, J. D. Aber, K. Newkirk, H. Lux et al., Soil warming and carbon-cycle feedbacks to the climate system, Science, vol.298, pp.2173-2176, 2002.

T. Mikkonen, K. R. Määttä, A. T. Hukkanen, H. I. Kokko, A. R. Törrönen et al., Flavonol content varies among black currant cultivars, J. Agric Food Chem, vol.49, pp.3274-3277, 2001.

A. E. Mitchell, Y. J. Hong, E. Koh, D. M. Barrett, D. E. Bryant et al., Ten-year comparison of the influence of organic and conventional crop man-agement practices on the content of flavonoids in tomatoes, J. Agric. Food Chem, vol.55, issue.15, pp.6154-6159, 2007.

G. Moreno, G. Gonzalez-bornay, F. Pulido, M. L. Lopez-diaz, M. Bertomeu et al., Organic vs. conventional agriculture: knowledge: power and in-novation in the food chain, Geoforum, vol.31, pp.159-173, 2000.

B. Moreno, S. Garcia-rodriguez, R. Cañizares, J. Castro, and E. Benítez, In southeastern Spain: Long-term effect of soil management on biological indicators of soil quality, Agric. Ecosyst. Environ, vol.131, pp.333-339, 2009.

K. Morgan and J. Murdoch, Organic vs. conventionalagriculture: knowledge, power and innovation in the food chain11This paper emerges from a research project -Organic Supply Chains in Wales -funded by the Welsh Office, the Development Board for Rural Wales, the Welsh Development, Geoforum, vol.31, pp.29-38, 2000.

E. Morriën, Understanding soil food web dynamics, how close do we get?, Soil Biol. Biochem, vol.102, pp.10-13, 2016.

A. J. Nath and R. Lal, Effects of tillage practices and land use management on soil aggregates and soil organic carbon in the north appalachian region, USA, Pedosphere, vol.27, pp.60301-60302, 2017.

R. M. Niemi, M. Vepsäläinen, K. Walleniu-s, K. Erkomaa, S. Kukkonen et al., Conventional versus organic cropping and peat amendment: impacts on soil microbiota and their activities, Eur. J. Soil Biol, vol.44, pp.419-428, 2008.

P. Ninfali, M. Bacchiocca, E. Biagiotti, S. Esposto, M. Servili et al., A 3-year study on quality, nutritional and organoleptic evaluation of organic and conventional extra-Virgin olive oils, J. Am. Oil Chem. Soc, vol.85, pp.151-158, 2008.

M. T. Nu?ez-de-gonzález, W. N. Osburn, M. D. Hardin, M. Longnecker, H. K. Garg et al., A survey of nitrate and nitrite concentrations in conventional and organic-Labeled raw vegetables at retail, J. Food Sci, vol.80, issue.5, pp.942-949, 2015.

E. Nunez-delicado, A. Sanchez-ferrer, F. F. Garcia-carmona, and J. M. Lopez-nicolas, Effect of organic farming practices on the level of latent polyphenol oxidase in grapes, J. Food Sci, vol.70, pp.74-82, 2005.

A. Occhipinti, Plant coevolution: evidences and new challenges, J. Plant Interact, vol.8, pp.188-196, 2013.

A. B. Oliveira, C. F. Moura, E. Gomes-filho, C. A. Marco, L. Urban et al., Antioxidant levels and inhibition of cancer cell proliferation in vitro by extracts from organically and conventionally cultivated strawberries, Agric. Ecosyst. Environ, vol.8, issue.2, 2006.

M. G. Paoletti, The role of earthworms for assessment of sustainability and as bioindicators, Agr. Ecosyst. Environ, vol.74, pp.137-155, 1999.

S. Parks and K. Lindhout, Pesticide Residues in Hydroponic Lettuce. HAL Project VG07165, Final Report. Horticulture Australia Ltd, pp.1-36, 2008.

K. Paustian, J. Lehmann, S. Ogle, D. Reay, G. P. Robertson et al., Climate-smart soils, Nature, vol.532, 2016.

C. Pelosi, M. Bertrand, and J. Roger-estrade, Earthworm community in conventional, organic and direct seeding with living mulch cropping systems, Agron. Sustain. Dev, vol.29, pp.287-295, 2009.
URL : https://hal.archives-ouvertes.fr/hal-01173154

C. Pelosi, L. Toutous, F. Chiron, F. Duns, M. Hedde et al., Reduction of pesticide use can improve earthworm populations in wheat crops in a Euroepan temperate region, Agr. Ecosyst. Environ, vol.181, pp.223-230, 2013.

C. Pelosi, S. Barot, Y. Capowiez, M. Hedde, and F. Vandenbulcke, Pesticides and earthworms: a review, Agron. Sustain. Develop, vol.34, pp.199-228, 2014.
URL : https://hal.archives-ouvertes.fr/hal-01234778

C. Pelosi, B. Pey, M. Hedde, G. Caro, Y. Capowiez et al., Reducing tillage in cultivated fields increases earthworm functional diversity, Appl. Soil Ecol, 2014.
URL : https://hal.archives-ouvertes.fr/hal-01096882

J. Pesek, S. Brown, K. L. Clancy, and D. C. Coleman, Agriculture and the Economy Alternative Agriculture, 1989.

B. Pey, J. Nahmani, A. Auclerc, Y. Capowiez, D. Cluzeau et al., Current use and future needs for soil invertebrate functional traits in community ecology, Basic Appl. Ecol, vol.15, pp.194-206, 2014.
URL : https://hal.archives-ouvertes.fr/hal-01005001

D. Pimentel, P. Hepperly, J. Hanson, D. Douds, and R. Seidel, Environmental, en-ergetic, and economic comparisons of organic and conventional farming systems, Bioscience, vol.55, pp.573-582, 2005.

J. F. Ponge, G. Pérès, M. Guernion, N. Ruiz-camacho, J. Cortet et al.,

C. Villenave, R. Chaussod, F. Martin-laurent, A. Bispo, and D. Cluzeau, The impact of agricultural practices on soil biota: a regional study, Soil Biol. Biochem, vol.67, pp.271-284, 2013.
URL : https://hal.archives-ouvertes.fr/hal-00869859

P. Prashar and S. Shah, Impact of fertilizers and pesticides on soil microflora in agriculture, Sustainable Agriculture Reviews, vol.19, pp.331-361, 2016.

Z. Premuzic, M. Bargiela, A. Garcia, A. Rendina, and A. Iorio, Calcium, iron, po-tassium, phosphorus, and vitamin C content of organic and hydroponic tomatoes, HortScience, vol.33, pp.255-257, 1998.

M. H. Rahman, A. Okubo, S. Sugiyama, H. F. Mayland, G. Rahmann et al., Physical, chemical and microbiological properties of an Andisol as related to land use and tillage practice, Soil Tillage Res, vol.101, pp.10-19, 2008.

W. David, L. Dengel, J. W. Erisman, A. C. Galvis-martinez, U. Hamm et al., Quantitative and qualitative microscale distribution of bacteria in soil, Res. Microbiol, vol.7, issue.8, pp.1251-1258, 2001.

A. Ratnadass, P. Fernandes, J. Avelino, and R. Habib, Plant species diversity for sustainable management of crop pests and diseases in agroecosystems: a review, Agron. Sustain. Dev, vol.32, pp.273-303, 2012.
URL : https://hal.archives-ouvertes.fr/hal-00930491

E. Rembia?kowska, Organic food: effect on nutrient composition, Encyclopedia of Food and Health, pp.171-177, 2016.

E. Rembialkowska, Organic farming as a system to provide better vegetable quality, International Conference on Quality in Chains. An Integrated View on Fruit and Vegetable Quality, vol.604, pp.473-479, 2003.

E. Rembialkowska, Quality of plant products from organic agriculture, J. Sci. Food Agr, vol.87, pp.2757-2762, 2007.

H. Ren, H. Endo, and T. Hayashi, Antioxidative and antimutagenic activities and polyphenol content of pesticide-free and organically cultivated green vegetables using watersoluble chitosan as a soil modifier and leaf surface spray, J. Sci. Food Agric, vol.81, pp.1426-1432, 2001.

M. Salem, J. Kohler, S. Wurst, and M. C. Rillig, Earthworms can modify effects of hydrochar on growth of Plantago lanceolata and performance of arbuscular mycor-rhizal fungi, Pedobiologia (Jena), vol.56, 2013.

M. W. Schmidt, M. S. Torn, S. Abiven, T. Dittmar, G. Guggenberger et al., Persistence of soil organic matter as an eco-system property, Nature, vol.478, pp.49-56, 2011.

I. Schneweis, K. Meyer, M. Ritzmann, P. Hoffmann, L. Dempfle et al., Influence of organically or conventionally produced wheat on health, performance and mycotoxin residues in tissues and bile of growing pigs, Qual. Plant-Pl. Fds Hum. Nutr, vol.59, pp.333-358, 1974.

V. Seufert, N. Ramankutty, and J. A. Foley, Comparing the yields of organic and conventional agriculture, Nature, vol.485, pp.229-232, 2012.

A. S. Shams, Effect of mineral, organic and bio-fertilizers on growth, yield, quality and sensory evaluation of Kohlrabi, Res. J. Agric. Biol. Sci, vol.8, issue.2, pp.305-314, 2012.

S. Sheibani, A. G. Ahangar, H. Bossuyt, S. Degryze, and K. Denef, A history of research on the link between (micro)aggregates, soil biota, and soil organic matter dynamics, JNAS.). www.jnasci.org. 132. Six, vol.79, pp.7-31, 2004.

P. Sollins, P. Homann, and B. A. Caldwell, Stabilization and destabilization of soil organic matter: mechanisms and controls, Geoderma, vol.74, pp.36-41, 1996.

G. Soto and C. Muñoz, Consideraciones teóricas y prácticas sobre el compost, y su empleo en la agricultura orgánica. Manejo Integr, vol.65, pp.123-129, 2002.

C. Sousa, P. Valentao, J. Rangel, and G. Lopes, Influence of two fertilization regimens on the amounts of organic acids and phenolic compounds of Tronchuda cabbage (Brassica oleracea L. var costata DC), J. Agric. Food Chem, vol.53, pp.9128-9132, 2005.

D. J. Spurgeon, A. M. Keith, O. Schmidt, D. R. Lammertsma, J. H. Faber et al., Land-use and land-management change: relationships with earthworm and fungi communities and soil structural properties, Agric. Ecosyst. Environ, vol.13, pp.80-99, 2013.

J. M. Alston, B. A. Babcock, and P. G. Pardey, The Shifting Patterns of Agricultural Production and Productivity Worldwide, CARD Books, vol.2, 2010.

G. P. Asner, A. J. Elmore, L. P. Olander, R. E. Martin, and A. T. Harris, Grazing systems, ecosystems responses, and global change, Annu. Rev. Environ. Resour, vol.29, pp.261-299, 2004.

J. M. Beddow, P. G. Pardey, J. Koo, and S. Wood, The changing landscape of global agriculture, The Shifting Patterns of Agricultural Production and Productivity Worldwide, 2010.

M. Bertrand, S. Barot, M. Blouin, J. Whalen, T. De-oliveira et al., Earthworm services for cropping systems. A review, Agron. Sustain. Dev, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01284301

J. C. Blankinship, S. J. Fonte, J. Six, and J. P. Schimel, Plant versus microbial controls on soil aggregate stability in a seasonally dry ecosystem, Geoderma, vol.272, 2016.

M. Blouin, M. E. Hodson, E. A. Delgado, G. Baker, L. Brussaard et al., A review of earthworm impact on soil function and ecosystem services, Eur. J. Soil Sci, vol.64, pp.161-182, 2013.
URL : https://hal.archives-ouvertes.fr/hal-00818329

M. Bouché, Des Vers De Terre Et Des Hommes. Découvrir Nos écosystèmes Fonctionnant à l'énergie Solaire. Acte Sud Nature, 2014.

I. Barois and P. Lavelle, Regulation of soil organic matter dynamics and microbial activity in the drilosphere and the role of interactions with other edaphic functional domains, Eur. J. Soil Biol, vol.36, pp.177-198, 2000.

L. Brussaard, D. K. Aanen, M. J. Briones, T. Decaëns, G. B. De-deyn et al., Biogeography and phylogenetic community structure of soil invertebrate ecosystem engineers: global to local patterns, implication for ecosystem functioning and services and global environmental change impact, Spoil Ecology and Ecosystem Services, pp.201-232, 2012.

R. M. Callaway, Positive interactions in plant communities and the individualisticcontinuum concept, Oecologia, vol.112, pp.143-149, 1997.

M. Carroll, J. Townshend, C. Dimiceli, P. Noojipady, and R. Sohlberg, A new global raster, 2009.

F. Cartenì, G. Bonanomi, F. Giannino, G. Incerti, C. E. Vincenot et al., Self-dna inhibitory effects: underlying mechanisms and ecological implications, Plant Signaling Behav, vol.11, issue.4, 2016.

,

I. Chen, P. J. Christie, and D. Dubnau, The ins and outs of DNA transfer in bacteria, 2005.

I. C. Chen, J. K. Hill, R. Ohlemüller, D. B. Roy, and C. D. Thomas, Rapid range shifts of species associated with high levels of climate warming, Science, vol.333, pp.1024-1026, 2011.

O. G. Chertov, On Soil Ecological Functions and Evolution, vol.3, pp.75-81, 1990.

F. Clements, Nature and structure of the climax, J. Ecol, vol.24, pp.252-284, 1936.

S. Collins, S. Glenn, and D. Roberts, The hierarchical continuum concept, J. Veg. Sci, vol.4, pp.149-156, 1993.

P. J. Coughtrey, C. H. Jones, M. H. Martin, and S. W. Shales, Litter accumulation in woodlands contaminated by Pb, Zn, Cd and Cu, Oecologia, vol.39, pp.51-60, 1979.

P. M. Cox, R. A. Betts, C. D. Jones, S. A. Spall, and I. J. Totterdell, Acceleration of global warming due to carbon-cycle feedbacks in a coupled climate model, Nature, vol.408, pp.184-187, 2000.

S. Díaz and M. Cabido, Plant functional types and ecosystem function in relation to global change, J. Veg. Sci, vol.8, pp.463-474, 1997.

R. Datta, A. Kelkar, D. Baraniya, A. Molaei, A. Moulick et al., Enzymatic degradation of lignin in soil: a review, 2017.

T. Decaëns, J. J. Jiménez, E. Barros, A. Chauvel, E. Blanchart et al., Soil macrofaunal communities in permanent pastures derived from tropical forest or savanna, Agric. Ecosyst. Environ, vol.103, pp.301-312, 2004.

G. Ernst and C. Emmerling, Impact of five different tillage systems on soil organic carbon content and the density biomass, and community composition of earthworms after a ten year period, Eur. J. Soil Biol, vol.45, pp.247-251, 2009.

J. A. Foley, R. De-fries, G. P. Asner, C. Barford, G. Bonan et al., Global consequences of land use, Science, vol.309, issue.80, pp.570-574, 2005.

C. Fragoso, G. G. Brown, J. C. Patrón, E. Blanchart, P. Lavelle et al., Agricultural intensification, soil biodiversity and agroecosystem function in the tropics: the role of earthworms, Appl. Soil Ecol, vol.6, pp.17-35, 1997.

K. E. Giller, M. H. Beare, P. Lavelle, A. Izac, and N. Swift, Agricultural intensification, soil biodiversity and agroecosystem function, Appl. Soil Ecol, vol.6, pp.149-156, 1997.

S. Gillet and J. Ponge, Humus forms and metal pollution in soil, Eur. J. Soil Sci, vol.53, pp.529-539, 2002.
URL : https://hal.archives-ouvertes.fr/hal-00498581

P. Gonzales, R. P. Neilson, J. M. Lenihan, and R. J. Drapek, Global patterns in the vulnerability of ecosystems to vegetation shifts due to climate change, Global Ecol. Biogeogr, vol.19, issue.6, pp.755-768, 2010.

C. Gyles and P. Boerlin, Horizontally transferred genetic elements and their role in pathogenesis of bacterial disease, Vet. Pathol, vol.51, pp.328-340, 2014.

I. T. Handa, R. Aerts, F. Berendse, M. P. Berg, A. Bruder et al., Consequences of biodiversity loss for litter decomposition across biomes, Nature, vol.509, 2014.

E. Havlicek and E. A. Mitchell, Soils supporting biodiversity, Interactions in Soil: Promoting Plant Growth, pp.27-58, 2014.

C. Jones, C. Mcconnell, K. Coleman, P. Cox, P. Falloon et al., Global climate change and soil carbon stocks; predictions from two contrasting models for the turnover of organic carbon in soil, Global Change Biol, vol.11, pp.154-166, 2005.

R. Lal, World cropland soils as a source or sink for atmospheric carbon, Adv. Agron, vol.71, pp.145-191, 2000.

R. Lal, Soil carbon sequestration impacts on global climate change and food security, Science, vol.304, pp.1623-1627, 2004.

J. W. Leff, S. E. Jones, S. M. Prober, A. Barberán, E. T. Borer et al., Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe, PNAS, vol.112, issue.35, pp.10967-10972, 2015.

F. T. Maestre, M. Delgado-baquerizo, T. C. Jeffries, D. J. Eldridge, V. Ochoa et al., Increasing aridity reduces soil microbial diversity and abundance in global drylands, PNAS, vol.112, issue.51, pp.15684-15689, 2015.

, , 2015.

S. Mazzoleni, G. Bonanomi, G. Incerti, M. Chiusano, P. Termolino et al., Inhibitory and toxic effects of extracellular self-DNA in litter: a mechanism for negative plant-soil feed-backs?, New Phytol, pp.1195-1210, 0205.

I. C. Meier, A. C. Finzi, and R. P. Phillips, Root exudates increase N availability by stimulating microbial turnover of fast-cycling N pools, Soil Biol. Biochem, vol.106, 2017.

J. A. Morgan, R. F. Follett, L. H. Allen, S. Del-grosso, J. D. Derner et al., Carbon se-questration in agricultural lands of the United States, J. Soil Water Conserv, vol.65, pp.6-13, 2010.

X. Morvan, N. P. Saby, D. Arrouays, C. Le-bas, R. J. Jones et al., Soil monitoring in Europe: a review of existing systems and requirements for harmonisation, Sci. Total Environ, vol.391, pp.1-12, 2008.

U. N. Nielsen, D. H. Wall, and J. Six, Soil biodiversity and the environment, Annu. Rev. Environ. Resour, vol.40, 2015.

J. Ponge, Emergent properties from organisms to ecosystems: towards a realistic approach, Biol. Rev, vol.80, pp.403-411, 2005.
URL : https://hal.archives-ouvertes.fr/hal-00363746

M. Roser, Land Use in Agriculture, 2016.

M. Roser and H. Ritchie, Yields and Land Use in Agriculture, OurWorldInData.org, 2017.

P. A. Sanchez, C. A. Palm, and S. W. Buol, Fertility capability soil classification: a tool to help assess soil quality in the tropics, Geoderma, vol.114, pp.157-185, 2003.

C. Scherber, N. Eisenhauer, W. W. Weisser, B. Schmid, W. Voigt et al., Bottom-up effects of plant diversity on multitrophic interac-tions in a biodiversity experiment, 2010.

K. Sebastian, Classification of Countries by Agricultural-Ecological Zone Class, 2006.

J. Settele, R. Scholes, R. Betts, S. Bunn, P. Leadley et al., Terrestrial and inland water systems, Climate Change 2014: Impacts, Adaptation, and Vulnerability. Part A: Global and Sectoral Aspects. Contribution of Working Group II to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change, pp.271-359, 2014.

J. Six, H. Bossuyt, S. Degryze, and K. Denef, A history of research on the link between (micro)aggregates, soil biota, and soil organic matter dynamics, Soil Tillage Res, vol.79, pp.7-31, 2004.

M. Spohn and L. Giani, Water-stable aggregates, glomalin-related soil protein, and carbohydrates in a chronosequence of sandy hydromorphic soils, Soil Biol. Biochem, vol.42, pp.1505-1511, 2010.

R. M. Sterritt and J. N. Lester, Interactions of heavy metals with bacteria, Sci. Total Environ, vol.14, pp.5-17, 1980.

J. N. Thompson, The Coevolutionary Process, 1994.

A. Vergnes, M. Blouin, A. Muratet, T. Z. Lerch, M. Mendez-millan et al., Initial conditions during Technosol implementation shape earth-worms and ants diversity, Landscape Urban Plann, vol.159, pp.32-41, 2017.

V. Lützow, M. Kögel-knabner, I. Ekschmitt, K. Matzner, E. Güggenberger et al., Stabilization of organic matter in temperate soils: mechanisms and their relevance under different soil conditions: a review, Eur. J. Soil Sci, vol.57, pp.426-445, 2006.

R. H. Whittaker, . Ny, M. R. Willig, D. M. Kaufman, and R. D. Stevens, Latitudinal gradients of biodiversity: pattern, process, scale, and synthesis, Annu. Rev. Ecol. Evol. Syst, vol.34, pp.273-309, 1975.

D. R. Zak, Z. B. Freedman, R. A. Upchurch, M. Steffens, and I. Kögel-knabner, Anthropogenic N deposition increases soil organic matter accumulation without altering its biochemical composition, Glob. Chang. Biol, vol.23, pp.933-944, 2017.

K. M. Wu and Y. Y. Guo, The evolution of cotton pest management practices in China, Annu. Rev. Entomol, vol.50, pp.31-52, 2004.

S. M. Wunderlich, C. Feldman, S. Kane, and T. Hazhin, Nutritional quality of organic, conventional, and seasonally grown broccoli using vitamin C as a marker, Int. J. Food Sci. Nutr, vol.59, pp.34-45, 2008.

S. Yang, Can organic crops compete with industrial agriculture?, Proc. R. Soc. B. Berkeley news, 2014.

J. E. Young, X. Zhao, E. E. Carey, and R. Weltl, Phytochemical phenolics in organically grown vegetables, Mol. Nutr. Food Res, vol.49, pp.1136-1142, 2005.

. References, A. Zanella, C. Bolzonella, J. Lowenfels, J. Ponge et al., TECHNO HUMUS SYSTEMS AND GLOBAL CHANGE -CONSERVATION AGRICULTURE AND 4/1000 PROPOSAL, vol.2, pp.271-296

L. K. Abbott and D. V. Murphy, Soil Biological Fertility: A Key to Sustainable Land Use in Agriculture, 2003.

A. Composteurs-de-france, Charte de bonnes pratiques de compostage agricole-Ensemble pour l'environnement. Version n°6, 2015.

M. Aira, L. Sampedro, F. Monroy, and J. Domínguez, Detritivorous earthworms directly modify the structure, thus altering the functioning of a microdecomposer food web, Soil Biol. Biochem, vol.40, pp.2511-2516, 2008.

L. Alfieri, Tenore in S.O. sullo stesso suolo rispetto all'arato (7 anni per SS, 10 per il MT). Fonte: sperimentazioni Di.Pro.Ve, 2013.

R. D. Bardgett and W. H. Van-der-putten, Belowground biodiversity and ecosystem functioning, Nature, vol.515, 2014.

J. Barea, M. J. Pozo, R. Azcon, and C. Azcon-aguilar, Microbial co-operation in the rhizosphere, J. Exp. Bot, vol.56, pp.1761-1778, 2005.

J. C. Bedano, M. P. Cantú, and M. E. Doucet, Influence of three different land management practices on soil mite (Arachnida: Acari) densities in relation to a natural soil, Appl. Soil Ecol, vol.32, pp.293-304, 2006.

C. R. Bhatia, Role of microbial diversity for soil, health and plant nutrition, Molecular Mechanisms of Plant and Microbe Coexistence, 2008.

. Springer, , pp.53-74

J. C. Blankinship, S. J. Fonte, J. Six, and J. P. Schimel, Plant versus microbial controls on soil aggregate stability in a seasonally dry ecosystem, Geoderma, vol.272, 2016.

M. Bouché, This amount could compensate: Découvrir nos écosystèmes fonctionnant à l'énergie solaire, Actes Sud, Collection < < Arbres en campagne > > , dirigée Par Alain Canet et Bruno Sirven-336 pages, 2014.

S. Boudsocq, A. Niboyet, J. C. Lata, X. Raynaud, N. Loeuille et al., Plant preference for ammonium versus nitrate: a neglected determinant of ecosystem functioning?, Am. Nat, vol.180, issue.1, pp.60-69, 2012.
URL : https://hal.archives-ouvertes.fr/hal-01003425

S. Brenna, M. Acutis, B. Acutis, A. Denti, C. Gardi et al., Il ruolo dell'agricoltura conservative nel bilancio del carbonio. Quaderni della Ricerca n. 153 -giugno, vol.148, 2013.

E. B. Brennan and V. Acosta-martinez, Cover cropping frequency is the main driver of soil microbial changes during six years of organic vegetable production, Soil Biol. Biochem, vol.109, 2017.

G. G. Brown, I. Barois, and P. Lavelle, Regulation of soil organic matter dynamics and microbial activity in the drilosphere and the role of interactions with other edaphic functional domains, Eur. J. Soil Biol, vol.36, pp.177-198, 2000.

L. Brussard, D. H. Wall, R. D. Bardgett, V. Behan-pelletier, J. E. Herrick et al., Microbial stoichiometry overrides biomass as a regulator of soil carbon and nitrogen cycling, Soil Ecology and Ecosystem Services, vol.96, pp.45-58, 2012.

D. H. Buckley and T. M. Schmidt, Diversity and dynamics of microbial communities in soils from agro-ecosystems, Environ. Microbiol, vol.5, pp.441-452, 2003.

M. Burger and L. E. Jackson, Plant and microbial nitrogen use and turnover: rapid conversion of nitrate to ammonium in soil with roots, Plant Soil, vol.266, pp.289-301, 2005.

J. Butterfield, S. Bingham, and A. Savory, Holistic Management Handbook Healthy Land, Healthy Profits, 2006.

A. Chabbi, J. Lehmann, P. Ciais, H. W. Loescher, M. F. Cotrufo et al., Aligning agriculture and climate policy, Nature Climate change, vol.7, issue.5, pp.307-309, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01536008

M. Clarholm, Effects of plant-bacterial-amoebal interactions on plant uptake of nitrogen under field conditions, Biol. Fertil. Soils, vol.8, pp.373-378, 1989.

D. Cluzeau, L. Fayolle, and I. Burakowski, Impacts sur les lombriciens des traitements pesticides, en particulier cupriques, dans le vignoble champenois. Comptes Rendus de l'Académie d'Agriculture de France, vol.8, pp.109-117, 1988.

D. Cluzeau, M. Guernion, R. Chaussod, F. Martin-laurent, C. Villenave et al., Integration of biodiversity in soil quality monitoring: baselines for microbial and soil fauna parameters for different land-use types, Eur. J. Soil Biol, vol.49, pp.63-72, 2012.
URL : https://hal.archives-ouvertes.fr/hal-00704897

J. Copley, Ecology goes underground, Nature, vol.406, pp.452-454, 2000.

C. Darwin, The Formation of Vegetable Mould Through the Action of Worms, with Observations on Their Habits, p.1881

R. Dawkins, The Selfish Gene: 30th-with a New Introduction by the Author, anniversary edition, 2006.

T. Decaëns, J. J. Jiménez, E. Barros, A. Chauvel, E. Blanchart et al., Soil macrofaunal communities in permanent pastures derived from tropical forest or savanna, Agric. Ecosyst. Environ, vol.103, pp.301-312, 2004.

A. M. Deutschbauer, D. Chivian, and A. P. Arkin, Genomics for environmental microbiology, Curr. Opin. Biotechnol, vol.17, pp.229-235, 2006.

J. Domínguez, State of the art and new perspectives on vermicomposting research, Earthworm Ecology, pp.401-424, 2004.

, FAO SOIL PORTAL, Management, Soil carbon sequestration, What is Soil Carbon Sequestration?, 2017.

N. Fierer, J. W. Leff, B. J. Adams, U. N. Nielsen, S. T. Bates et al., Cross-biome metagenomic analyses of soil microbial communities and their functional attributes, PNAS, vol.109, issue.52, pp.21390-21395, 2012.

A. H. Fitter, C. A. Gilligan, K. Hollingworth, A. Kleczkowski, R. M. Twyman et al., Biodiversity and ecosystem function in soil, Funct. Ecol, vol.19, pp.369-377, 2005.

A. H. Fitter, Darkness visible: reflections on underground ecology, J. Ecol, vol.93, pp.231-243, 2005.

S. Fontaine and S. Barot, Size and functional diversity of microbe populations control plant persistence and long-term soil carbon accumulation, Ecol. Lett, vol.8, pp.1075-1087, 2005.

, Agriculture and Consumer Protection Department, 2007.

J. I. Fritz, . Franke, I. H. Franke-whittle, S. Haindl, H. Insam et al., Microbiological community analysis of vermicompost tea and its influence on the growth of vegetables and cereals, Can. J. Microbiol, vol.58, pp.836-847, 2012.

K. E. Fujimura, N. A. Slusher, M. D. Cabana, and S. V. Lynch, Role of the gut microbiota in defining human health, Expert Rev. Anti. Infect. Ther, vol.8, pp.435-454, 2010.

M. Fukuoka, The Natural Way Of Farming-The Theory and Practice of Green Philosophy, 1985.

R. R. Fulthorpe, A. N. Rhodes, and J. M. Tiedje, High levels of endemicity of 3-chlorobenzoate-degrading soil bacteria, Appl. Environ. Microbiol, vol.64, issue.5, pp.1620-1627, 1998.

V. Gewin, Genomics: discovery in the dirt, Nature, vol.439, pp.384-386, 2006.

G. Gleixner, Soil organic matter dynamics: a biological perspective derived from the use of compound-specific isotopes studies, Ecol. Res, vol.28, issue.5, pp.683-695, 2013.

J. M. Gobat, M. Aragno, and W. Mtthey, Le sol vivant, 3er edn, Presses Polytechniques et Universitaires Romandes, 2010.

K. Gruber, Deep influence of soil microbes, Nat. Plants, vol.1, 2015.

C. M. Guinane and P. D. Cotter, Role of the gut microbiota in health and chronic gastrointestinal disease: understanding a hidden metabolic organ, 2013.

A. C. Mchardy, J. L. Dangl, R. Knight, R. Ley, and P. Schulze-lefert, Microbiota and host nutrition across plant and animal kingdoms, Cell Host Microbe, vol.17, pp.603-616, 2015.

L. Han, K. Sun, J. Jin, and B. Xing, Some concepts of soil organic carbon characteristics and mineral interaction from a review of literature, Soil Biol. Biochem, 2016.

E. Havlicek and E. A. Mitchell, Interactions in Soil: Promoting Plant Growth. http:// dx, 2014.

T. Hernández, C. Chocano, J. L. Moreno, and C. García, Towards a more sustainable fertilization: combined use of compost and inorganic fertilization for tomato culti-vation, 2014.

, Agric. Ecosyst. Environ, vol.196, pp.178-184

A. Hodge, D. Robinson, and A. Fitter, Are microorganisms more effective than plants at competing for nitrogen?, Trends Plant Sci, vol.5, pp.304-308, 2000.

K. Hua, D. Wang, X. Guo, and Z. Guo, Carbon Sequestration Efficiency of Organic Amendments in a Long-Term Experiment on a, 2014.

J. D. Jastrow, R. M. Miller, and J. Lussenhop, Contributions of interacting biological mechanisms to soil aggregate stabilization in restored prairie, Soil Biol. Biochem, vol.30, pp.905-916, 1998.

H. Jenny, Factors of Soil Formation. A System of Quantitative Pedology, 1941.

J. F. Johansson, L. R. Paul, and R. D. Finlay, Microbial interactions in the mycorrhizosphere and their significance for sustainable agriculture, FEMS Microbiol. Ecol, vol.48, pp.1-13, 2004.

P. Jouquet, N. Bottinelli, P. Podwojewski, V. Hallaire, and T. Tran-duc, Chemical and physical properties of earthworm casts as compared to bulk soil under a range of different land-use systems in Vietnam, 2008.
URL : https://hal.archives-ouvertes.fr/bioemco-00396260

C. M. Kallenbach, S. D. Frey, and A. S. Grandy, Direct evidence for microbial-derived soil organic matter formation and its ecophysiological controls, Nat. Commun, vol.7, 2016.

T. Kassam, F. R. Derpsch, and J. Kienzle, Overview of the worldwide spread of conservation agriculture, Field Actions Sci. Rep, vol.8, 2015.

M. Keiluweit, J. J. Bougoure, P. S. Nico, J. Pett-ridge, P. K. Weber et al., Mineral protection of soil carbon counteracted by root exudates, Nat. Clim. Change, vol.5, pp.588-595, 2015.

M. G. Kibblewhite, K. Ritz, and M. J. Swift, Soil health in agricultural systems, Phil. Trans. R. Soc. B, vol.363, pp.685-701, 2008.

H. Kirchmann and G. Thorvaldsson, Challenging targets for future agriculture, Eur. J. Agron, vol.12, pp.145-161, 2000.

Y. Kuzyakov and E. Blagodatskaya, Microbial hotspots and hot moments in soil: concept & review, Soil Biol. Biochem, 2015.

R. Lal and J. P. Bruce, The potential of world cropland soils to sequester C and mitigate the greenhouse effect, Environ. Sci. Policy, vol.2, pp.177-185, 1999.

R. Lal, W. Negassa, and K. Lorenz, Carbon sequestration in soil, Curr. Opin. Environ. Sustain, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01234833

R. Lal, World soils and the carbon cycle in relation to climate change and food security, Global Soil Week, vol.2012, pp.1-52, 2012.

S. K. Lam, D. Chen, A. R. Mosier, and R. Roush, The potential for carbon sequestration in Australian agricultural soils is technically and economically limited, Sci. Rep, vol.3, 2013.

M. Lange, N. Eisenhauer, C. A. Sierra, H. Bessler, C. Engels et al., Plant diversity increases soil microbial activity and soil carbon storage, Nat. Commun, vol.6, 2015.

P. Lavelle, D. H. Wall, R. D. Bardgett, V. Behan-pelletier, J. E. Herrick et al., Soil as a habitat, Soil Ecology and Ecosystem Services, pp.1-27, 2012.

J. W. Leff, S. E. Jones, S. M. Prober, A. Barberán, E. T. Borer et al., Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe, PNAS, vol.112, issue.35, pp.10967-10972, 2015.

J. Lehmann and M. Kleber, Perspective The contentious nature of soil organic matter, Nature, vol.528, issue.7580, pp.0-8, 2015.

L. , E. G. Rowell, and T. E. , The evolution of mutualism and other forms of har-mony at various levels of biological rganization, Écologie, vol.26, pp.131-158, 1995.

L. , E. G. Vermeij, and G. J. , Does natural selection organize ecosystems for the maintenance of high productivity and diversity? Phil, Trans. R. Soc. Lond. B, vol.357, pp.709-718, 2002.

L. and E. G. , When does the good of the group override the advantage of the individual?, Proc. Natl. Acad. Sci. U. S. A, vol.80, pp.2985-2989, 1983.

S. Liu, B. S. Razavi, X. Su, M. Maharjan, M. Zarebanadkouki et al., Spatio-temporal patterns of enzyme activities after manure ap-plication reflect mechanisms of niche differentiation between plants and micro-organisms, Soil Biol. Biochem, vol.112, pp.100-109, 2017.

J. Lowenfeels and W. Lewis, Teaming with Microbes. The Organic Gardener's Guide to the Soil Food Web, vol.220, p.p, 2010.

J. Lowenfeels, Teaming with Nutrients. The Organic Gardener's Guide to Optimizing Plant Nutrition, vol.250, p.p, 2013.

J. Lowenfeels, Teaming with Fungi. The Organic Grower's Guide to Mycorrhizae, vol.212, p.p, 2017.

Z. Luo, E. Wang, and O. J. Sun, Soil carbon change and its responses to agricultural practices in Australian agro-ecosystems: a review and synthesis, Geoderma, vol.155, pp.211-223, 2010.

J. M. Lynch, A. Benedetti, H. Insam, M. P. Nuti, K. Smalla et al., Microbial diversity in soil: ecological theories, the contribution of molecular techniques and the impact of transgenic plants and transgenic microorganisms, Biol. Fertil. Soils, vol.40, pp.363-385, 2004.

F. T. Maestre, M. Delgado-baquerizo, T. C. Jeffries, D. J. Eldridge, V. Ochoa et al., Increasing aridity reduces soil microbial diversity and abundance in global drylands, PNAS, vol.112, issue.51, pp.15684-15689, 2015.

, , 2015.

A. A. Malik, S. Chowdhury, V. Schlager, A. Oliver, J. Puissant et al., Soil fungal: bacterial ratios are linked to altered carbon cycling, Front. Microbiol, vol.7, 2016.

R. J. Manlay, C. Feller, and M. J. Swift, Historical evolution of soil organic matter concepts and their relationships with the fertility and sustainability of cropping systems, Agric. Ecosyst. Environ, vol.119, pp.217-233, 2007.
URL : https://hal.archives-ouvertes.fr/hal-01419614

C. Masclaux-daubresse, F. Daniel-vedele, J. Dechorgnat, F. Chardon, L. Gaufichon et al., Nitrogen uptake, assimilation and remobilization in plants: challenges for sustainable and productive agriculture, Ann. Bot, 2010.
URL : https://hal.archives-ouvertes.fr/hal-01203920

S. Mazzoleni, F. Carteni, G. Bonanomi, M. Senatore, P. Termolino et al., Inhibitory effects of extracellular self-DNA: a general biological process?, New Phytol, vol.2015, issue.206, pp.127-132, 2015.

A. Mcbratney, T. Koppi, and D. J. Field, Radical soil management for Australia: a rejuvenation process, Geoderma Reg, vol.7, pp.132-136, 2016.

M. Meinshausen, N. Meinshausen, W. Hare, S. C. Raper, K. Frieler et al., Greenhouse-gas emission targets for limiting global warming to 2 °C, Nature, vol.458, pp.1158-1162, 2009.

P. Meli, J. M. Benayas, P. Balvanera, and M. M. Ramos, Restoration enhances wetland biodiversity and ecosystem service supply, but results are context-dependent: a meta-analysis, PLoS One, vol.9, 2014.

A. Miltner, P. Bombach, B. Schmidt-brücken, and M. Kästner, SOM genesis: microbial biomass as a significant source, Biogeochemistry, vol.111, issue.1-3, pp.41-55, 2012.

B. Minasny and A. B. Mcbratney, Limited effect of organic matter on soil available water capacity, Eur. J. Soil Sci, vol.1, issue.9, 2017.

F. Monroy, M. Aira, and J. Domínguez, Epigeic earthworms increase soil arthropod populations during first steps of decomposition of organic matter, Pedobiologia, vol.54, issue.2, pp.93-99, 2011.

E. Morriën, Understanding soil food web dynamics, how close do we get?, Soil Biol. Biochem, vol.102, pp.10-13, 2016.

B. Murphy, Greener Pastures on Your Side of the Fence: Better Farming With Voisin Management Intensive Grazing, seventh printing, vol.675, 2010.

M. Mustin, Gestion e la matière organique, François Dubusc, vol.954, p.p, 1987.

A. Nebbioso and A. Piccolo, Advances in humeomics: enhanced structural identifi-cation of humic molecules after size fractionation of a soil humic acid, Anal. Chim. Acta, vol.720, pp.77-90, 2012.

A. A. Nikol&apos;skii, Ecological inheritance in the biological signal field of mammals, Russ. J. Ecol, vol.45, pp.76-79, 2014.

J. D. Odling-smee, D. H. Erwin, E. P. Palkovacs, M. W. Feldman, and K. N. Laland, Niche construction theory: a practical guide for ecologists, Q. Rev. Biol, vol.88, pp.3-28, 2013.

A. Olof, T. Lindberg, U. Boström, M. Clarholm, A. Hansson et al., Organic carbon and nitrogen flows, Ecol. Bull, vol.40, pp.85-126, 1990.

C. Palm, H. Blanco-canqui, F. Declerck, L. Gatere, and P. Grace, Conservation agriculture and ecosystem services: an overview, Agric. Ecosyst. Environ, vol.187, 2014.

M. G. Paoletti, The role of earthworms for assessment of sustainability and as bioindicators, Agr. Ecosyst. Environ, vol.74, pp.137-155, 1999.

E. A. Paul, The nature and dynamics of soil organic matter: plant inputs, microbial transformations, and organic matter stabilization, Soil Biol. Biochem, 2016.

K. Paustian, J. Lehmann, S. Ogle, D. Reay, G. P. Robertson et al., Climatesmart soils, Nature, vol.532, 2016.

G. Pietramellara, J. Ascher, F. Borgogni, M. T. Ceccherini, G. Guerri et al., Extracellular DNA in soil and sediment: fate and ecological relevance, Biol. Fertil. Soils, vol.45, pp.219-235, 2009.

R. Pinton, Z. Varanini, and P. Nannipieri, The Rhizosphere: Biochemistry and Organic Substances at the Soil-Plant Interface, Second Edition, Books in Soils Plants, and the Environment, 2007.

J. Ponge, The soil as an ecosystem, Biol Fertil Soils, vol.51, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01183395

P. Prashar and S. Shah, Impact of fertilizers and pesticides on soil microflora in agriculture, Sustainable Agriculture Reviews, vol.19, pp.331-361, 2016.

S. Pugesgaard, K. Schelde, S. U. Larsen, P. E. Laerke, U. Jørgensen et al., Comparing annual and perennial crops for bioenergy production-influence on nitrate leaching and energy balance, Compost. Sci. Util, vol.7, pp.55-60, 2004.

A. D. Rovira, Y. Sánchez-de-león, J. Lugo-pérez, D. H. Wise, J. G. Jastrow et al., Plant root exudates, Bot. Rev, vol.35, 1969.

M. A. , Aggregate formation and carbon sequestration by earthworms in soil from a temperate forest exposed to elevated atmospheric CO2: A microcosm experiment, Soil Biol. Biochem, vol.68, 2014.

D. Saha, S. S. Kukal, and S. Sharma, Land use impacts on SOC fractions and aggregate stability in Typic Ustochrepts of Northwest India, Plant Soil, vol.339, pp.457-470, 2011.

D. Saha, S. S. Kukal, and S. S. Bawa, Soil organic carbon stock and fractions in relation to land use and soil depth in the degraded Shiwaliks hills of lower Himalayas, Land Degrad. Dev, vol.25, pp.407-416, 2014.

S. Salmon, The impact of earthworms on the abundance of Collembola: improvement of food resources or of habitat?, Biol. Fertil. Soils, vol.40, pp.323-333, 2004.

A. Savory and J. Butterfield, Holistic Management, Third Edition. A Commonsense Revolution to Restore Our Environment, vol.552, p.p, 2016.

S. Scheu, M. E. Schipanski, M. Barbercheck, M. R. Douglas, D. M. Finney et al., A fra-mework for evaluating ecosystem services provided by cover crops in agroecosys-tems, Eur. J. Soil Biol, vol.38, pp.11-20, 2002.

W. H. Schlesinger, Carbon sequestration in soils: some cautions amidst optimism, Agric. Ecosyst. Environ, vol.82, pp.121-127, 2000.

M. W. Schmidt, M. S. Torn, S. Abiven, T. Dittmar, G. Guggenberger et al., Persistence of soil organic matter as an ecosystem property, Nature, vol.478, pp.49-56, 2011.

D. Scott, D. Markewitz, P. Hendrix, D. Coleman, V. Sechi et al., Soil aggregates and associated organic matter under conventional tillage no-tillage, and forest succession after three decades, Agric. Ecosyst. Environ, vol.9, issue.1, 2014.

V. Smil, Crop residues: agriculture's largest harvest: crop residues incorporate more than half of the world's agricultural phytomass, Bioscience, vol.49, issue.4, pp.299-308, 1999.

J. Smith, P. Smith, M. Wattenbach, S. Zaehle, R. Hiederer et al., Projected changes in mineral soil carbon of European croplands and grasslands, Global Change Biol, vol.11, pp.2141-2152, 1990.

R. Spaccini, A. Piccolo, P. Conte, G. Haberhauer, and M. H. Gerzabek, Increased soil organic carbon sequestration through hydrophobic protection by humic substances, Soil Biol. Biochem, vol.34, pp.1839-1851, 2002.

M. Spohn and L. Giani, Water-stable aggregates, glomalin-related soil protein, and carbohydrates in a chronosequence of sandy hydromorphic soils, Soil Biol. Biochem, vol.42, pp.1505-1511, 2010.

M. Spohn, K. Klaus, W. Wanek, and A. Richter, Microbial carbon use efficiency and biomass turnover times depending on soil depth-implications for carbon cycling, Soil Biol. Biochem, vol.96, 2016.

F. J. Stevenson, Humus Chemistry: Genesis, Composition, Reactions, 1994.

U. Stockmann, M. A. Adams, J. W. Crawford, D. J. Field, N. Henakaarchchi et al., The knowns, known unknowns and unknowns of sequestration of soil organic carbon, Agric. Ecosyst. Environ, vol.164, pp.80-99, 2013.
URL : https://hal.archives-ouvertes.fr/hal-01594846

U. Stockmann, J. Padarian, A. Mcbratney, B. Minasny, D. De-brogniez et al., Global soil organic carbon assessment, Global Food Secur, vol.6, pp.9-16, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01605260

R. Sutton and G. Sposito, Critical review molecular structure in soil humic substances: the new view, Environ. Sci. Technol, vol.39, issue.510, pp.9009-9015, 2005.

J. P. Taylor, B. Wilson, M. S. Mills, and R. G. Burns, Comparison of microbial numbers and enzymatic activities in surface soils and subsoils various techniques, Soil Biol. Biochem, vol.34, pp.387-401, 2002.

L. K. Ursell, J. L. Metcalf, L. W. Parfrey, R. ;. Knight, and . De-boer, Dinner in the dark: illuminating drivers of soil organic matter decomposition, Soil Biol. Biochem, vol.70, pp.38-44, 2012.

N. Verhulst, R. Cox, and B. Govaerts, Soil Aggregate Stability by Wet Sieving: A Practical Guide for Comparing Crop Management Practices, CIMMYT, vol.7, p.pages, 2013.

M. J. Wade, An experimental study of group selection, Evolution, vol.31, pp.134-153, 1977.

G. W. Wamelink, J. Y. Frissel, W. H. Krijnen, M. R. Verwoert, and P. W. Goedhart, Can plants grow on mars and the moon: a growth experiment on mars and moon soil simulants, PLoS One, vol.9, 2014.

K. Wasak and M. Drewnik, Land use effects on soil organic carbon sequestration in calcareous Leptosols in former pastureland-a case study from the Tatra Mountains (Poland), Solid Earth, vol.6, pp.1103-1115, 2015.

T. O. West and W. M. Post, Soil organic carbon sequestration rates by tillage and crop rotation, Soil Sci. Soc. Am. J, vol.66, pp.1930-1946, 2002.

I. Wheeler, The Auditability of Soil Carbon at the Farm Scale, 2014.

W. G. Whitford, Keystone arthropods as webmasters in desert ecosystems, CAB International, pp.25-41, 2000.

L. Wickenbrock and C. Heisler, Influence of earthworm activity on the abundance of collembola in soil, Soil Biol. Biochem, vol.29, pp.517-521, 1997.

G. Wieland, R. Neumann, and H. Backhaus, Variation of microbial communities in soil, rhizosphere, and rhizoplane in response to crop species, soil type, and crop development, Appl. Environ. Microbiol, vol.67, pp.5849-5854, 2001.

D. S. Wilson and E. O. Wilson, Evolution 'for the good of the group', Am. Sci, vol.96, pp.380-389, 2008.

D. H. Wise, W. E. Snyder, P. Tuntibunpakul, and J. Halaj, Spiders in decomposition food webs of agroecosystems: theory and evidence, J. Arachnol, vol.27, pp.363-370, 1999.

J. Xie, M. Hou, Y. Zhou, R. Wang, S. Zhang et al., Carbon seques-tration and mineralization of aggregate-associated carbon in an intensively cultivated Anthrosol in north China as affected by long term fertilization, Geoderma, vol.296, pp.1-9, 2017.

R. E. Yoder, A direct method of aggregate size analysis of soils and a study of the physical nature of erosion losses, J. Am. Soc. Agron, vol.28, pp.337-351, 1936.

T. Zhang, M. J. Wooster, D. C. Green, and B. Main, New field-based agricultural biomass burning trace gas, PM2. 5, and black carbon emission ratios and factors measured in situ at crop residue fires in Eastern China, Atmospheric Environment, vol.121, pp.22-34, 2015.

, OTHER REFERENCES (CITED BY THE AUTHORS OF THIS ARTICLE IN THEIR INTERVENTIONS; OTHER REFERENCES ARE DIRECTLY CITED UNDER THE CONTRIBUTION AND THEIR TITLES HELP IN UNDERSTANDING THEIR ENGAGED CONTENTS)

T. Palmer, The Butterfly Effect -What Does It Really Signify?". Oxford U. Dept. of Mathematics Youtube Channel. Retrieved 13, 2017.

K. E. , Lorenz and the End of the Cartesian Universe". MIT Department of Earth, Atmospheric, and Planetary Sciences Youtube channel, 2018.

B. B. Ghaley, T. Rusu, T. Sandén, H. Spiegel, C. Menta et al., Assessment of benefits of conservation agriculture on soil functions in arable production systems in Europe, 2018.

C. Menta, B. Bonati, F. Staffilani, and F. D. Conti, Agriculture Management and Soil Fauna Monitoring: The Case of Emilia-Romagna Region (Italy), Agri Res & Tech: Open Access J, vol.4, issue.5, p.555649, 2017.

C. Menta, A. Tagliapietra, G. Caoduro, A. Zanetti, and S. Pinto, Ibs-Bf and Qbs-Ar Comparison: Two Quantitative Indices Based on Soil Fauna Community, EC Agricul¬ture, vol.2, pp.427-439, 2015.

C. Menta, A. Leoni, C. Gardi, and F. Conti, Are grasslands important habitats for soil microarthropod conservation?, Biodiversity and Conservation, vol.20, pp.1073-1087, 2011.

C. Menta, A. Leoni, K. Tarasconi, and P. Affanni, Does compost use affect microarthropod soil communities?, Fresenius Environmental Bulletin, vol.19, pp.2303-2311, 2010.

V. Tabaglio, C. Gavazzi, and C. Menta, Physico-chemical indicators and microarthropod communities as influenced by no-till, conventional tillage and nitrogen fertilisation after four years of continuous maize, Soil & Tillage Research, vol.105, pp.135-142, 2009.

G. Adeux, E. Vieren, S. Carlesi, P. Bàrberi, N. Munier-jolain et al., Mitigating crop yield losses through weed diversity, Nature Sustainability, vol.2, pp.1018-1026, 2019.

M. Bara?ski, D. ?rednicka-tober, N. Volakakis, C. Seal, R. Sanderson et al., Higher antioxidant and lower cadmium concentrations and lower incidence of pesticide residues in organically grown crops: a systematic literature review and metaanalyses, The British Journal of Nutrition, vol.112, pp.794-811, 2014.

C. Abitabile, F. Marras, and L. Viganò, , 2017.

C. Bolzonella, M. Lucchetta, G. Teo, V. Boatto, and A. Zanella, Is there a way to rate insecticides that is less detrimental to human and environmental health? Global Ecology and Conservation 20, p.699, 2019.

F. Jiguet, L. Sunnen, A. Prévot, and K. Princé, Urban pigeons losing toes due to human activities, Biological Conservation, vol.240, p.108241, 2019.
URL : https://hal.archives-ouvertes.fr/hal-02367233

D. C. Coleman, E. P. Odum, and D. A. Crossley, Soil biology, soil ecology, and global change, Biology and Fertility of Soils, vol.14, pp.104-111, 1992.

E. P. Odum and G. W. Barrett, Redesigning Industrial Agroecosystems, Journal of Crop Improvement, vol.11, pp.45-60, 2004.