Changes in cecal microbiota and mucosal gene expression revealed new aspects of epizootic rabbit enteropathy, PLoS ONE, vol.9, p.105707, 2014. ,
Early Salmonella Typhimurium infection in pigs disrupts microbiome composition and functionality principally at the ileum mucosa, Sci Rep, vol.8, p.7788, 2018. ,
The underlying microbial mechanism of epizootic rabbit enteropathy triggered by a low fiber diet, Sci Rep, vol.8, p.12489, 2018. ,
The role of the intestinal microbiota in enteric infection, J Physiol, vol.587, pp.4159-67, 2009. ,
Control of pathogens and pathobionts by the gut microbiota, Nat Immunol, vol.14, pp.685-90, 2013. ,
Interactions between the microbiota and the immune system, Science, vol.336, pp.1268-73, 2012. ,
Microbial exposure during early life has persistent effects on natural killer T cell function, Science, vol.336, pp.489-93, 2012. ,
A weaning reaction to microbiota is required for resistance to immunopathologies in the adult, Immunity, vol.50, pp.1276-88, 2019. ,
Human gut microbiome viewed across age and geography, Nature, vol.486, pp.222-229, 2012. ,
Postnatal development of the rabbit caecal microbiota composition and activity, FEMS Microbiol Ecol, vol.77, pp.680-689, 2011. ,
Faecal microbiota shift during weaning transition in piglets and evaluation of AO blood types as shaping factor for the bacterial community profile, PLoS ONE, vol.14, p.217001, 2019. ,
Establishment of ruminal bacterial community in dairy calves from birth to weaning is sequential, J Appl Microbiol, vol.116, pp.245-57, 2014. ,
The neonatal window of opportunity: setting the stage for life-long host-microbial interaction and immune homeostasis, J Immunol, vol.198, pp.557-63, 2017. ,
Caecal microflora and fermentation pattern in exclusively milk-fed young rabbits, Reprod Nutr Dev, vol.39, pp.223-253, 1999. ,
URL : https://hal.archives-ouvertes.fr/hal-00900296
Succession of microbial consortia in the developing infant gut microbiome, Proc Natl Acad Sci, pp.4578-85, 2011. ,
Age, introduction of solid feed and weaning are more important determinants of gut bacterial succession in piglets than breed and nursing mother as revealed by a reciprocal cross-fostering model, Environ Microbiol, vol.18, pp.1566-77, 2016. ,
The pattern of behaviour of rabbit pups in the nest, Behaviour, vol.79, pp.255-71, 1982. ,
Effect of nursing method and faeces consumption on the development of bacetroides, lactobacillus and coliform flora in the caecum of the newborn rabbits, Reprod Nutr Dev, vol.46, pp.205-215, 2006. ,
Coprophagous behavior of rabbit pups affects implantation of cecal microbiota and health status, J Anim Sci, vol.92, pp.652-65, 2014. ,
Early solid additional feeding of suckling rabbits from 3 to 15 days of age, Animal, vol.12, pp.28-33, 2018. ,
Onset of feed intake of the suckling rabbit and evidence of dietary preferences according to pellet physical properties, Anim Feed Sci Technol, vol.255, p.114223, 2019. ,
Effect of dietary mannan-oligosaccharides on in vivo performance, nutrient digestibility and caecal content characteristics of growing rabbits, J Anim Physiol Anim Nutr, vol.96, pp.130-136, 2012. ,
Growth performance, apparent nutrient digestibility, caecal fermentation, ileal morphology and caecal microflora of growing rabbits fed diets containing probiotics and prebiotics, Livest Sci, vol.157, pp.184-90, 2013. ,
Effect of a starter diet supplementation with mannan-oligosaccharide or inulin on health status, caecal metabolism, digestibility of nutrients and growth of early weaned rabbits, Animal, vol.1, pp.523-553, 2007. ,
The first prebiotics in humans: human milk oligosaccharides, J Clin Gastroenterol, pp.80-83, 2004. ,
Rabbit milk: a review of quantity, quality and non-dietary affecting factors, World Rabbit Sci, vol.14, pp.205-235, 2010. ,
Human milk oligosaccharides: every baby needs a sugar mama, Glycobiology, vol.22, pp.1147-62, 2012. ,
Shaping the infant microbiome with non-digestible carbohydrates, Front Microbiol, vol.10, p.343, 2019. ,
Insights into suckling rabbit feeding behaviour: acceptability of different creep feed presentations and attractiveness for sensory feed additives, Animal, pp.1-9, 2020. ,
Technical note : an original system to separately control litter and female feed intake without modification of the mother -young relations, World Rabbit Sci, vol.8, pp.177-180, 2000. ,
Feed intake limitation strategies for the growing rabbit: effect on feeding behaviour, welfare, performance, digestive physiology and health: a review, Animal, vol.6, pp.1407-1426, 2012. ,
Technical note: attempts to harmonise chemical analyses of feeds and faeces, for rabbit feed evaluation, World Rabbit Sci, vol.9, pp.57-64, 2001. ,
Ammonia determination based on indophenol formation with sodium salicylate, Water Res, vol.12, pp.399-402, 1977. ,
Determination of the volatile fatty acid content in the rumen liquid: comparison of gas chromatography and capillary isotachophoresis, Acta Vet Brno, vol.78, pp.627-660, 2009. ,
Gut microbiota derived metabolites contribute to intestinal barrier maturation at the suckling-to-weaning transition, Gut Microbes, pp.1-19, 2020. ,
URL : https://hal.archives-ouvertes.fr/hal-02564848
Diversity and co-occurrence pattern analysis of cecal microbiota establishment at the onset of solid feeding in young rabbits, Front Microbiol, vol.10, p.973, 2019. ,
URL : https://hal.archives-ouvertes.fr/hal-02154596
FROGS: find, rapidly, OTUs with galaxy solution, Bioinformatics, vol.34, pp.1287-94, 2018. ,
Swarm: robust and fast clustering method for amplicon-based studies, PeerJ, vol.2, p.593, 2014. ,
VSEARCH: a versatile open source tool for metagenomics, PeerJ, vol.4, p.2584, 2016. ,
The SILVA ribosomal RNA gene database project: improved data processing and webbased tools, Nucleic Acids Res, vol.41, pp.590-596, 2013. ,
phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data, PLoS ONE, vol.8, p.61217, 2013. ,
Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors, Proc Natl Acad Sci, vol.107, pp.18933-18941, 2010. ,
mixOmics: an R package for 'omics feature selection and multiple data integration, PLoS Comput Biol, vol.13, p.1005752, 2017. ,
Adjustment of frequently used chi-square procedures for the effect of site-to-site dependencies in the analysis of dental data, J Dent Res, vol.68, pp.1350-1354, 1989. ,
Adjusted chi-square statistics: application to clustered binary data in primary care, Ann Fam Med, vol.2, pp.201-204, 2004. ,
Exploring Studbooks for Wildlife Management and Conservation, p.291, 2016. ,
B cell and antibody repertoire development in rabbits: the requirement of gut-associated lymphoid tissues, Dev Comp Immunol, vol.30, pp.137-53, 2006. ,
Feeding in Domestic Vertebrates: From Structure to Behaviour, p.384, 2006. ,
URL : https://hal.archives-ouvertes.fr/hal-00117418
Feeding in Domestic Vertebrates: from Structure to Behavior, pp.50-60, 2006. ,
Feeding behaviour of rabbits, pp.233-252, 2010. ,
URL : https://hal.archives-ouvertes.fr/hal-02630476
Orientation response of newborn rabbits to odours of lactating females: relative effectiveness of surface and milk cues, Anim Behav, vol.61, pp.153-62, 2001. ,
Chemical and behavioural characterization of the rabbit mammary pheromone, Nature, vol.424, pp.68-72, 2003. ,
URL : https://hal.archives-ouvertes.fr/hal-00103386
Effect of mannan oligosaccharides on rabbit performance, digestibility and rectal bacterial anaerobic populations during an episode of epizootic rabbit enteropathy, World Rabbit Sci, vol.18, pp.9-16, 2010. ,
Performance, blood profile, carcass and meat traits and tissue morphology in growing rabbits fed mannanoligosaccharides and zincbacitracin continuously or intermittently, Anim Sci Pap Rep, vol.33, pp.85-101, 2015. ,
Effect of inulin and mannan-oligosaccharides compared with zinc-bacitracin on growing performance, nutrient digestibility and hematological profiles of growing rabbits, Anim Prod Sci, vol.55, pp.80-86, 2016. ,
Metagenomic insights into the effects of fructo-oligosaccharides (FOS) on the composition of fecal microbiota in mice, J Agric Food Chem, vol.9, pp.856-63, 2015. ,
Mannan oligosaccharides in nursery pig nutrition and their potential mode of action, Animals, vol.2, pp.261-74, 2012. ,
Role of yeast cell wall polysaccharides in pig nutrition and health protection, Livest Sci, vol.109, pp.161-166, 2007. ,
Fructooligosaccharides-Occurrence, preparation, and application, Enzyme Microb Tech, vol.19, pp.107-124, 1996. ,
De la biologie à l'élevage. Versailles: Quae éditions, p.288, 2015. ,
Gut microbiota fermentation of prebiotics increases satietogenic and incretin gut peptide production with consequences for appetite sensation and glucose response after a meal, Am J Clin Nutr, vol.90, pp.1236-1279, 2009. ,
Fecal secretory immunoglobulin A is increased in healthy infants who receive a formula with short-chain galacto-oligosaccharides and long-chain fructo-oligosaccharides, J Nutr, vol.138, pp.1141-1148, 2008. ,
Cocoa-enriched diets modulate intestinal and systemic humoral immune response in young adult rats, Mol Nutr Food Res, vol.55, pp.56-66, 2011. ,
Lymphoid tissue genesis induced by commensals through NOD1 regulates intestinal homeostasis, Nature, vol.456, pp.507-517, 2008. ,
URL : https://hal.archives-ouvertes.fr/pasteur-01402759
Lactobacillus cells in the rabbit digestive tract and factors affecting their distribution, J Appl Bact, vol.75, pp.269-75, 1993. ,
Alternatives to antibiotic growth promoters in rabbit feeding: a review, World Rabbit Sci, vol.15, pp.127-167, 2007. ,
Untangling the genetic basis of fibrolytic specialization by Lachnospiraceae and Ruminococcaceae in diverse gut communities, Diversity, vol.5, pp.627-667, 2013. ,
Characterization of the 17 strains of regulatory T cell-inducing humanderived clostridia, Gut Microbes, vol.5, pp.333-342, 2014. ,
Paraprevotella clara gen. nov., sp. nov. and Paraprevotella xylaniphila sp. nov., members of the family "Prevotellaceae" isolated from human faeces, Int J Syst Evol Micrbiol, vol.59, pp.1895-900, 2009. ,
Microbial-derived butyrate promotes epithelial barrier function through IL-10 receptor-dependent repression of Claudin-2, J Immunol, vol.199, pp.2976-84, 2017. ,
Gastrointestinal tract (gut) health in the young pig, Anim Nutr, vol.4, pp.187-96, 2018. ,
Microbiome profiling of commercial pigs from farrow to finish, J Anim Sci, vol.96, pp.1778-94, 2018. ,
Human gut microbiome: function matters, Trends Microbiol, vol.26, pp.563-74, 2018. ,
Antibacterial activity of casein-derived peptides isolated from rabbit (Oryctolagus cuniculus) milk, J Dairy Res, vol.70, pp.189-97, 2003. ,
Shaping the gut microbiota by breastfeeding: the gateway to allergy prevention? Front Pediatr, vol.7, p.47, 2019. ,
Infant gut microbiota development is driven by transition to family foods independent of maternal obesity. mSphere, vol.1, pp.69-84, 2016. ,
Effect of weaning diet and weaning age on growth, body composition and caecal fermentation of young rabbits, Anim Sci, vol.77, pp.101-112, 2003. ,
Immediate postnatal suckling in the rabbit: its influence on pup survival and growth, Reprod Nutr Dev, vol.40, pp.19-32, 2000. ,
Individually assessed creep food consumption by suckled piglets: influence on post-weaning food intake characteristics and indicators of gut structure and hind-gut fermentation, Anim Sci, vol.78, pp.67-75, 2004. ,