Vegetation is a common feature in natural coastal and riverine water ways, interacting with both the water flow and sediment transport. However, the physical processes governing these interactions are still poorly understood, which makes it difficult to predict sediment transport and morphodynamics in a vegetated environment. We performed a simple experiment to study how sediment transport responds to the presence of flexible, single-blade vegetation, and how this response is influenced by the vegetation density. We found that the skin friction and sediment transport are reduced in a plant patch, and that this effect is larger for denser vegetation. We then evaluated several methods to calculate the skin friction in a vegetated flow, which is the key to sediment transport prediction. Among these, the inversion of bed load transport formulas and the Einstein and Banks (1950) methods appeared to produce the most reasonable values of the skin friction. Finally, we suggest using the parameter alpha, which is the ratio of the skin friction computed by these methods to the total bed shear stress, to make more realistic sediment transport predictions in morphodynamic models.