Identification of a gene in Mycoplasma hominis associated with preterm birth and microbial burden in intraamniotic infection, Am. J. Obstet. Gynecol, vol.212, 2015. ,
The integrative conjugative element (ICE) of Mycoplasma agalactiae: key elements involved in horizontal dissemination and influence of coresident ICEs, vol.9, pp.873-891, 2018. ,
MolliGen, a database dedicated to the comparative genomics of Mollicutes, Nucleic Acids Res, vol.32, pp.307-310, 2004. ,
URL : https://hal.archives-ouvertes.fr/hal-00306648
Xanthomonas AvrBs3 family-type III effectors: discovery and function, Annu. Rev. Phytopathol, vol.48, pp.419-436, 2010. ,
Breaking the code of DNA binding specificity of TAL-type III effectors, Science, vol.326, pp.1509-1512, 2009. ,
Trimmomatic: a flexible trimmer for Illumina sequence data, Bioinformatics, vol.30, pp.2114-2120, 2014. ,
Distribution and diversity of mycoplasma plasmids: lessons from cryptic genetic elements, BMC Microbiol, vol.12, p.257, 2012. ,
URL : https://hal.archives-ouvertes.fr/hal-01191304
Shaping bacterial genomes with integrative and conjugative elements, Res. Microbiol, vol.155, pp.376-386, 2004. ,
An excision-competent and exogenous mosaic transposon harbors the tetM gene in multiple Mycoplasma hominis lineages, Antimicrob. Agents Chemother, vol.59, pp.6665-6666, 2015. ,
Analysis of the complete Mycoplasma hominis LBD-4 genome sequence reveals strain-variable prophage insertion and distinctive repeat-containing surface protein arrangements, Genome Announc, vol.3, pp.1582-1596, 2015. ,
Complete genome sequence of Mycoplasma hominis strain Sprott (ATCC 33131), isolated from a patient with nongonococcal urethritis, Genome Announc, vol.3, pp.771-786, 2015. ,
Molecular genetic analysis of ICEF, an integrative conjugal element that is present as a repetitive sequence in the chromosome of Mycoplasma fermentans PG18, J. Bacteriol, vol.184, pp.6929-6941, 2002. ,
, 164 UK Mycoplasma hominis AST Surveillance 2005-2015: High Variation in the Genetic Components Included in tet(M) Resistance Cassette, and Three Potential Therapeutics to Combat Combined Fluoroquinolone/Tetracycline Resistance, 2018.
Horizontal gene transfers in Mycoplasmas (Mollicutes), Curr. Issues Mol. Biol, vol.29, pp.3-22, 2018. ,
Breaking the DNA-binding code of Ralstonia solanacearum TAL effectors provides new possibilities to generate plant resistance genes against bacterial wilt disease, New Phytol, vol.199, pp.773-786, 2013. ,
The hidden life of integrative and conjugative elements, FEMS Microbiol. Rev, vol.41, pp.512-537, 2017. ,
Recognition of methylated DNA by TAL effectors, Cell Res, vol.22, pp.1502-1504, 2012. ,
ICEA of Mycoplasma agalactiae: a new family of self, 2013. ,
, Mol. Microbiol, vol.89, pp.1226-1239
Chromosomal transfers in mycoplasmas: when minimal genomes go mobile, vol.5, p.1958, 2014. ,
TAL effectors: highly adaptable phytobacterial virulence factors and readily engineered DNA-targeting proteins, Trends Cell. Biol, vol.23, pp.390-398, 2013. ,
Intrinsic protein disorder in complete genomes, Genome Inform. Ser. Workshop Genome Inform, vol.11, pp.161-171, 2000. ,
, , 2019.
, PLoS Genet, vol.15, p.1007910
Diversity of Mycoplasma hominis clinical isolates from Bordeaux, France, as assessed by multiple-locus variable-number tandem repeat analysis, BMC Microbiol, vol.13, p.120, 2013. ,
An emerging mycoplasma associated with trichomoniasis, vaginal infection and disease, PLoS One, vol.9, p.110943, 2014. ,
Mycoplasma hominis impacts gene expression in Trichomonas vaginalis, Parasitol. Res, vol.117, pp.841-847, 2018. ,
Essential genes of a minimal bacterium, Proc. Natl. Acad. Sci. U.S.A, vol.103, pp.425-430, 2006. ,
Type IV secretion in gram-negative and gram-positive bacteria, Mol. Microbiol, vol.107, pp.455-471, 2018. ,
The diversity of prokaryotic DDE transposases of the mutator superfamily, insertion specificity, and association with conjugation machineries, Genome Biol. Evol, vol.6, pp.260-272, 2014. ,
URL : https://hal.archives-ouvertes.fr/hal-01117685
Repeat domain diversity of avrBs3-like genes in Ralstonia solanacearum strains and association with host preferences in the field, Appl. Environ. Microb, vol.73, pp.4379-4384, 2007. ,
, Frontiers in Microbiology | www.frontiersin.org
Integrative and Conjugative Elements (ICEs): what they do and how they work, Annu. Rev. Genet, vol.49, pp.577-601, 2015. ,
BurrH: a new modular DNA binding protein for genome engineering, Sci. Rep, vol.4, p.3831, 2014. ,
URL : https://hal.archives-ouvertes.fr/hal-01606222
Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation, Genome Res, vol.27, pp.722-736, 2017. ,
TAL effectors: function, structure, engineering and applications, Curr. Opin. Struct. Biol, vol.23, pp.93-99, 2013. ,
Evidence for the predominance of a single tet(M) gene sequence type in tetracycline-resistant Ureaplasma parvum and Mycoplasma hominis isolates from Tunisian patients, J. Med. Microbiol, vol.61, pp.1254-1261, 2012. ,
URL : https://hal.archives-ouvertes.fr/pasteur-00733229
Genomic mosaics, 2014. ,
A new integrative conjugative element occurs in Mycoplasma agalactiae as chromosomal and free circular forms, J. Bacteriol, vol.188, pp.4137-4141, 2006. ,
Unique vaginal microbiota that includes an unknown Mycoplasma-like organism is associated with Trichomonas vaginalis infection, J. Infect. Dis, vol.207, pp.1922-1931, 2013. ,
Tetracycline and fluoroquinolone resistance in clinical Ureaplasma spp. and Mycoplasma hominis isolates in France between 2010 and 2015, J. Antimicrob. Chemother, vol.73, pp.2696-2703, 2018. ,
Improved specificity of TALE-based genome editing using an expanded RVD repertoire, Nat. Methods, vol.12, pp.465-471, 2015. ,
Structural disorder of plasmid-encoded proteins in bacteria and archaea, BMC Bioinformatics, vol.19, p.158, 2018. ,
Integrated information and prospects for gliding mechanism of the pathogenic bacterium Mycoplasma pneumoniae, Front. Microbiol, vol.7, p.960, 2016. ,
Identification of putative TAL effector targets of the citrus canker pathogens shows functional convergence underlying disease development and defense response, BMC Genomics, vol.15, p.157, 2014. ,
Life on arginine for Mycoplasma hominis: clues from its minimal genome and comparison with other human urogenital mycoplasmas, PLoS Genet, vol.5, p.1000677, 2009. ,
URL : https://hal.archives-ouvertes.fr/hal-00645937
Mycoplasma hominis parasitism of Trichomonas vaginalis, Lancet, vol.352, pp.41-45, 1998. ,
Tetracycline-resistant Mycoplasma hominis strains contain streptococcal tetM sequences, Antimicrob. Agents. Chemother, vol.28, pp.141-143, 1985. ,
Gene-forgene-mediated recognition of nuclear-targeted AvrBs3-like bacterial effector proteins, J. Plant. Physiol, vol.163, pp.256-272, 2006. ,
Prokka: rapid prokaryotic genome annotation, Bioinformatics, vol.30, pp.2068-2069, 2014. ,
ABySS: a parallel assembler for short read sequence data, Genome Res, vol.19, pp.1117-1123, 2009. ,
Being pathogenic, plastic, and sexual while living with a nearly minimal bacterial genome, PLoS Genet, vol.3, p.75, 2007. ,
URL : https://hal.archives-ouvertes.fr/hal-00306574
Expression, purification, crystallization and preliminary X-ray diffraction analysis of the novel modular DNA-binding protein BurrH in its apo form and in complex with its target DNA, Acta Crystallogr. F Struct. Biol. Commun, vol.70, pp.87-91, 2014. ,
Integrative conjugative elements are widespread in field isolates of Mycoplasma species pathogenic for ruminants, Appl. Environ. Microb, vol.81, pp.1634-1643, 2015. ,
Mycoplasma mycoides, from "mycoides small colony" to "capri". A microevolutionary perspective, BMC Genomics, vol.12, p.114, 2011. ,
New developments in human diseases due to mycoplasmas, Mycoplasmas: Molecular Biology, Pathogenicity, and Strategies for Control, pp.289-354, 2005. ,
Congenital and opportunistic infections: Ureaplasma species and Mycoplasma hominis, Semin. Fetal. Neonat. Med, vol.14, pp.190-199, 2009. ,
Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement, PLoS One, vol.9, p.112963, 2014. ,
Complete genome sequence of Mycoplasma bovis type strain PG45 (ATCC 25523), Infect. Immun, vol.79, pp.982-983, 2011. ,
Phylogenetic analysis of the mycoplasmas, Proc. Natl. Acad. Sci. U.S.A, vol.77, pp.494-498, 1980. ,
Complete decoding of TAL effectors for DNA recognition, Cell Res, vol.24, pp.628-631, 2014. ,