F. Tardieu, L. Cabrera-bosquet, T. Pridmore, and M. Bennett, Plant phenomics, from sensors to knowledge, Current Biology, vol.27, issue.15, pp.770-783, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01608414

F. Fiorani and U. Schurr, Future scenarios for plant phenotyping, Annual Review of Plant Biology, vol.64, pp.267-291, 2013.

F. Oury, C. Godin, and A. Mailliard, A study of genetic progress due to selection reveals a negative effect of climate change on bread wheat yield in France, European Journal of Agronomy, vol.40, pp.28-38, 2012.
URL : https://hal.archives-ouvertes.fr/hal-00964262

H. Fraga, I. García-de-cortázar-atauri, A. C. Malheiro, and J. A. Santos, Modelling climate change impacts on viticultural yield, phenology and stress conditions in Europe, GCB Bioenergy, vol.22, issue.11, pp.3774-3788, 2016.

M. D. Wilkinson, M. Dumontier, and I. J. Aalbersberg, The FAIR Guiding Principles for scientific data management and stewardship, Scientific Data, vol.3, p.160018, 2016.

H. ?wiek-kupczy?ska, T. Altmann, and D. Arend, Measures for interoperability of phenotypic data: minimum information requirements and formatting, Plant Methods, vol.12, issue.1, 2016.

P. Krajewski, D. Chen, and H. ?wiek, Towards recommendations for metadata and data handling in plant phenotyping, Journal of Experimental Botany, vol.66, issue.18, pp.5417-5427, 2015.
URL : https://hal.archives-ouvertes.fr/hal-02620800

R. Shrestha, L. Matteis, and M. Skofic, Bridging the phenotypic and genetic data useful for integrated breeding through a data annotation using the Crop Ontology developed by the crop communities of practice, Frontiers in Physiology, vol.3, 2012.

C. J. Mungall, G. V. Gkoutos, C. L. Smith, M. A. Haendel, S. E. Lewis et al., Integrating phenotype ontologies across multiple species, Genome Biology, vol.11, issue.1, p.2, 2010.

L. Cooper and P. , The plant ontology: a tool for plant genomics, Methods in Molecular Biology, vol.1374, pp.89-114, 2016.

L. Cooper, A. Meier, and M. Laporte, The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics, Nucleic Acids Research, vol.46, issue.D1, pp.1168-1180, 2018.

R. Abbeloos, J. E. Backlund, and M. B. Salido, BrAPI -an application programming interface for plant breeding applications, Bioinformatics, 2019.
URL : https://hal.archives-ouvertes.fr/hal-02626802

A. Adam-blondon, M. Alaux, and C. Pommier, Towards an open grapevine information system, Horticulture Research, vol.3, issue.1, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01404714

E. Yeumo, M. Alaux, and E. Arnaud, Developing data interoperability using standards: A wheat community use case, vol.6, p.1843, 2017.
URL : https://hal.archives-ouvertes.fr/lirmm-01652022

L. Harper, J. Campbell, and E. K. Cannon, AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture, Article ID bay088, vol.2018, 2018.
URL : https://hal.archives-ouvertes.fr/lirmm-01964769

M. Lenzerini, Data Integration: A Theoretical Perspective, 2002.

C. Bizer, T. Heath, and T. Berners-lee, Linked data-the story so far, International Journal on Semantic Web and Information Systems, vol.5, issue.3, pp.1-22, 2009.

C. M. Andorf, E. K. Cannon, and J. L. Portwood, MaizeGDB update: new tools, data and interface for the maize model organism database, Nucleic Acids Research, vol.44, issue.D1, pp.1195-1201, 2016.

N. Alkhalifah, D. A. Campbell, and C. M. Falcon, Maize Genomes to Fields: 2014 and 2015 field season genotype, phenotype, environment, and inbred ear image datasets, BMC Research Notes, vol.11, issue.1, 2018.

V. C. Blake, C. Birkett, D. E. Matthews, D. L. Hane, P. Bradbury et al., The triticeae toolbox: combining phenotype and genotype data to advance small-grains breeding, The Plant Genome, vol.9, issue.2, 2016.

J. Fabre, M. Dauzat, and V. Nègre, PHENOPSIS DB: an Information System for Arabidopsis thaliana phenotypic data in an environmental context, BMC Plant Biology, vol.11, issue.1, p.77, 2011.
URL : https://hal.archives-ouvertes.fr/hal-01018993

Y. Li, G. Kennedy, F. Davies, and J. Hunter, PODD: an ontology-driven data repository for collaborative phenomics research, The Role of Digital Libraries in a Time of Global Change, vol.6102, pp.179-188, 2010.

P. Neveu, A. Tireau, and N. Hilgert, Dealing with multi-source and multi-scale information in plant phenomics: the ontologydriven Phenotyping Hybrid Information System, New Phytologist, vol.221, issue.1, pp.588-601, 2019.
URL : https://hal.archives-ouvertes.fr/hal-02627721

D. Steinbach, M. Alaux, and J. Amselem, GnpIS: an information system to integrate genetic and genomic data from plants and fungi, Database, vol.2013, 2013.

M. Alaux, J. Rogers, and T. Letellier, Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data, Genome Biology, vol.19, issue.1, 2018.
URL : https://hal.archives-ouvertes.fr/hal-02278879

C. Plomion, J. Aury, and J. Amselem, Oak genome reveals facets of long lifespan, Nature Plants, vol.4, issue.7, pp.440-452, 2018.
URL : https://hal.archives-ouvertes.fr/hal-01820559

M. Bide, The DOI -Twenty Years On, D-Lib Magazine, vol.21, issue.7, 2015.

J. Madin, S. Bowers, M. Schildhauer, S. Krivov, D. Pennington et al., An ontology for describing and synthesizing ecological observation data, Ecological Informatics, vol.2, issue.3, pp.279-296, 2007.

M. B. Mark and . Schildhauer, OBOE: the Extensible Observation Ontology, 2016.

C. J. Mungall and D. B. Emmert, The FlyBase Consortium, A Chado case study: an ontology-based modular schema for representing genome-associated biological information, Bioinformatics, vol.23, issue.13, pp.337-346, 2007.

A. Alercia, S. Diulgheroff, M. Mackay, . Fao/bioversity, and . Multi, , 2015.

R. M. Bruskiewich, A. B. Cosico, and W. Eusebio, Linking genotype to phenotype: The International Rice Information System (IRIS), Bioinformatics, vol.19, issue.1, pp.63-65, 2003.

E. F. Codd, A relational model of data for large shared data banks, Communications of the ACM, vol.13, issue.6, pp.377-387, 1970.

C. Jonquet, A. Toulet, and E. Arnaud, AgroPortal: A vocabulary and ontology repository for agronomy, Computers and Electronics in Agriculture, vol.144, pp.126-143, 2018.
URL : https://hal.archives-ouvertes.fr/lirmm-01679502

S. Jupp, T. Burdett, and O. Vrousgou, A new Ontology lookup service at EMBL-EBI, Proceedings of SWAT4LS International Conference, 2015.

M. D. Wilkinson, S. Sansone, E. Schultes, P. Doorn, L. O. Bonino-da et al., A design framework and exemplar metrics for FAIRness, 2017.

F. Oury, E. Heumez, and B. Rolland, Winter wheat (Triticum aestivum L) phenotypic data from the multiannual, multilocal field trials of the INRA Small Grain Cereals Network, 2015.

, Data models to GO-FAIR, Nature Genetics, vol.49, issue.7, pp.971-971, 2017.

N. Fernandez-pozo, N. Menda, and J. D. Edwards, The Sol Genomics Network (SGN)-from genotype to phenotype to breeding, Nucleic Acids Research, vol.43, issue.D1, pp.1036-1041, 2015.

S. Leonelli, R. P. Davey, E. Arnaud, G. Parry, and R. Bastow, Data management and best practice for plant science, Nature Plants, vol.3, issue.6, 2017.