Temporal mapping of phytoplankton assemblages in Lake Geneva: Annual and interannual changes in their patterns of succession, Limnol. Oceanogr, vol.47, pp.1355-1366, 2002. ,
Phosphorus decrease and climate variability: mediator of synchrony in phytoplankton changes among European peri-alpine lakes, Freshwater Biol, vol.50, pp.1731-1746, 2005. ,
Long-term changes in the copepod community of Lake Geneva, J. Plankton Res, vol.29, pp.49-59, 2007. ,
URL : https://hal.archives-ouvertes.fr/hal-00481490
L'empreinte du changement climatique dans le Léman, Arch. Sci, vol.66, pp.157-172, 2013. ,
Global ecological patterns in uncultured archaea, ISME J, vol.4, pp.182-190, 2010. ,
The ecological role of watercolumn microbes in the sea, Mar. Ecol.-Prog. Ser, vol.10, pp.257-263, 1983. ,
Effects of grazers and viruses on bacterial community structure and production in two contrasting trophic lakes, BMC Microb, vol.11, pp.1-18, 2011. ,
Viral activity in two contrasting lake ecosystems, Appl. Environ. Microbiol, vol.70, pp.2941-2951, 2004. ,
URL : https://hal.archives-ouvertes.fr/hal-00527505
Nitrate/nitrite assimilation system of the marine cyanobacterium Synechococcus sp. strain WH8103: Effect of nitrogen source and availability on gene expression, Appl. Environ. Microbiol, vol.39, pp.425-448, 1999. ,
Picophytoplankton in freshwater ecosystems: the importance of small-sized phototrophs, Freshwater Rev, vol.1, pp.1-28, 2008. ,
Single cells and microcolonies of freshwater picocyanobacteria: a common ecology, J. Limnol, vol.69, pp.257-277, 2010. ,
Freshwater autotrophic picoplankton: a review, J. Limnol, vol.61, pp.1-14, 2002. ,
Effects of pH on the growth and carbon uptake of marine phytoplankton, Mar. Ecol.-Prog. Ser, vol.109, pp.83-94, 1994. ,
Evidence that viral abundance across oceans and lakes is driven by different biological factors, Freshwater Biol, vol.53, pp.1090-1100, 2008. ,
Depth-related gradients of viral activity in Lake Pavin, Appl. Environ. Microbiol, vol.72, pp.4440-4445, 2006. ,
URL : https://hal.archives-ouvertes.fr/hal-00525893
The phosphorus-chlorophyll relationship in lakes, Limnol. Oceanogr, vol.19, pp.767-773, 1974. ,
Flow cytometric analysis of bacteriaand virus-like particles in lake sediments, J. Microbiol. Meth, vol.64, pp.316-322, 2006. ,
A dual-labeling method for the simultaneous measurement of dissolved inorganic carbon and phosphate uptake by marine planktonic species, Limnol. Oceanogr. Meth, vol.4, pp.416-425, 2005. ,
URL : https://hal.archives-ouvertes.fr/hal-02179297
Assessing the microbial community dynamics and the role of viruses as bacterial mortality agents in Lake Geneva, J. Water Sci, vol.19, pp.115-126, 2006. ,
Direct estimates of the contribution of viral lysis and microzooplankton grazing to the decline of a Micromonas spp. population, Aquat. Microb. Ecol, vol.30, pp.1236-1242, 1995. ,
Comparative analyses in aquatic microbial ecology: how far do they go?, FEMS Microbiol. Ecol, vol.31, pp.99-106, 2000. ,
Photosynthetic characteristics of picoplankton compared with those of higher phytoplankton populations in various water masses in the Gulf of Maine, Biol. Oceanogr, vol.3, pp.932-935, 1977. ,
, Phytoplankton ecology: Structure, function, and fluctuationm Chapman and Hall, 1986.
, A treatise on limnology, vol.2, 1967.
Effect of inorganic and organic nutrient addition on a coastal microbial community, Mar. Ecol.-Prog. Ser, vol.56, pp.3-14, 2002. ,
Viruses in aquatic ecosystems: important advancements of the last 20 years and prospects for the future in microbial oceanography and limnology, Adv. Oceanogr. Limnol, vol.1, pp.71-101, 2010. ,
, , p.220, 2012.
A few tests prior to flow cytometry and epifluorescence analyses of freshwater bacterioand virioplankton communities, Flow Cytometry: Principles, Methodology and Applications, pp.1-30, 2013. ,
Bacterial population dynamics, production, and heterotrophic activity in a recently formed reservoir, Can. J. Microbiol, vol.45, pp.747-753, 1999. ,
URL : https://hal.archives-ouvertes.fr/hal-00527685
Modified dilution technique to estimate viral versus grazing mortality of phytoplankton: limitations associated with method sensitivity in natural waters, Aquat. Microb. Ecol, vol.49, pp.207-222, 2007. ,
Evolution physico-chimique des eaux du Léman, rapport CIPEL pour l'année, pp.26-50, 2011. ,
Courantologie lémanique: le refroidissement hivernal, Découvrir le Léman 100 ans après François-Alphonse Forel, Actes du colloque pluridisciplinaire, Editions Slatkine, pp.53-67, 1999. ,
Autotrophic picoplankton in the tropical ocean, Science, vol.219, pp.292-295, 1983. ,
Viral abundance in aquatic systems: a comparison between marine and fresh waters, Mar. Ecol.-Prog. Ser, vol.121, pp.217-226, 1995. ,
Spatial and temporal distributions of prochlorophyte picoplankton in the North Atlantic ocean, Deep-Sea Res, vol.37, pp.1033-1051, 1990. ,
Dynamics of various viral groups infecting autotrophic plankton in Lake Geneva, Adv. Ocean. Limnol, vol.3, pp.171-191, 2012. ,
URL : https://hal.archives-ouvertes.fr/hal-02641922
Appareil de prelevement d'un echantillon dans un fluide, INRA Patent number, 1978. ,
Seasonal and spatial variability of virio-, bacterio, and picophytoplanktonic abundances in three peri-alpine lakes, Hydrobiologia, vol.627, pp.99-116, 2009. ,
Seasonal variations of microbial abundances and of virusvs. flagellate-induced mortality of picophytoplankton in some peri-alpine lakes, J. Plankton Res, vol.31, pp.1161-1177, 2009. ,
Phage bacteriolysis, protistan bacterivory, and bacterial production in a freshwater reservoir: coupling with temperature, The twelfth Tansley Lecture: Small is beautiful: The picophytoplankton, vol.300, pp.503-513, 1983. ,
Physiological characteristics of picophytoplankton, isolated from Lake Kinneret: responses to light and temperature, J. Plankton Res, vol.24, pp.1173-1183, 2002. ,
Ocean Biogeochemical Dynamics, 2006. ,
Current beliefs regarding dominance by blue-greens: the case for the importance of CO 2 and pH, Verhand. Int. Ver. Theor. Angew. Limnol, vol.24, pp.38-54, 1990. ,
, Charactérisation des particules virales planctoniques dans un lac du Massif Central Français: Aspects méthodologiques et premiers résultats, vol.32, pp.259-263, 1996.
Microbial food webs in fresh water planktonic ecosystems, Complex interactions in lake communities, pp.69-83, 1988. ,
Viruses in the sea, Evidence of warming effects on phytoplankton productivity rates and their dependence on eutrophication status, vol.437, pp.973-982, 2005. ,
Microbial food web in boreal humic lakes and reservoirs: ciliates as a major factor related to the dynamics of the most active bacteria, Microb. Ecol, vol.49, pp.325-341, 2005. ,
Phytoplankton productivity increased in Lake Geneva despite phosphorus loading reduction, J. Plankton Res, vol.31, pp.1179-1194, 2009. ,
Viral abundance, production, decay rates and life strategies (lysogeny versus lysis) in Lake Bourget (France), Environ. Microbiol, vol.13, pp.616-630, 2011. ,
URL : https://hal.archives-ouvertes.fr/hal-00820093
, Neue Wege in der quantitativen Erfassung des Planktons (mit besonderer Berücksichtigung des Ultraplanktons), vol.5, pp.483-510, 1931.
Ecology of prokaryotic viruses, FEMS Microbiol. Rev, vol.28, pp.127-181, 2004. ,
Significance of viral lysis and flagellate grazing as factors controlling bacterioplankton production in a eutrophic lake, Appl. Environ. Microbiol, vol.64, pp.431-438, 1998. ,
Comparison of epi-fluorescence and transmission electron microscopy for counting viruses in natural marine waters, Aquat. Microb. Ecol, vol.13, pp.225-232, 1997. ,
Reconsidering transmission electron microscopy based estimates of viral infection of bacterioplankton using conversion factors derived from natural communities, Aquat. Microb. Ecol, vol.27, pp.103-110, 2002. ,
, Limnology, lake and river ecosystems, p.1006, 2000.
Prokaryotes: the unseen majority, P. Natl. Acad. Sci, vol.95, pp.6578-6583, 1998. ,
A dilution technique for the direct measurement of viral production: a comparison in stratified and tidally mixed coastal waters, Microb. Ecol, vol.43, pp.168-173, 2002. ,
Ecology and Diversity of Picoeukaryotes, Microbial Ecology of the Ocean, 2008. ,
Assessing the dynamics and ecology of marine picophytoplankton: the importance of the eukaryotic component, Limnol. Oceanogr, vol.49, pp.168-179, 2004. ,
Temporal dynamics and structure of picocyanobacteria and cyanomyoviruses in two large and deep peri-alpine lakes, FEMS Microbiol. Ecol, vol.86, pp.312-326, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-02645443