I. Aguilar, I. Misztal, D. L. Johnson, A. Legarra, S. Tsuruta et al., Hot topic: a unified approach to utilize phenotypic, full pedigree and genomic information for genetic evaluation of Holstein final score, J. Dairy Sci, vol.93, pp.743-752, 2010.

I. Aguilar, I. Misztal, A. Legarra, and S. Tsuruta, Efficient computation of the genomic relationship matrix and other matrices used in single-step evaluation, J. Anim. Breed. Genet, vol.128, pp.422-428, 2011.
URL : https://hal.archives-ouvertes.fr/hal-02645733

J. M. Astruc, G. Lagriffoul, H. Larroque, A. Legarra, C. Moreno et al., Use of genomic data in French dairy sheep breeding programs: results and prospects, Proc. 37 ème session d'ICAR, 2010.

J. M. Astruc, G. Baloche, H. Larroque, I. Beltran-de-heredia, J. Labatut et al., La sélection génomique des ovins laitiers en France : stratégie, premiers résultats des évaluations génomiques et perspectives, Renc. Rech. Rum, vol.19, pp.81-84, 2012.

J. M. Astruc, G. Baloche, F. Barillet, and A. Legarra, Genomic evaluation validation test proposed by Interbull is necessary but not sufficient because it does not check the correct genetic trend. 39 th ICAR session, 2014.

G. Baloche, A. Legarra, G. Sallé, H. Larroque, J. M. Astruc et al., Assessment of accuracy of genomic prediction for French Lacaune dairy sheep, J. Dairy Sci, vol.97, pp.1107-1116, 2014.
URL : https://hal.archives-ouvertes.fr/hal-02634041

G. Baloche, J. M. Astruc, P. Boulenc, B. Giral-viala, P. Guibert et al., Genomic selection experiment in Lacaune dairy sheep: progeny test results of rams initially selected either on parent average or on genomic prediction, Proc. 10 th World Congr, p.335, 2014.

F. Barillet, Genetics of milk production, The Genetics of, vol.20, pp.539-564, 1997.

F. Barillet, A. Carta, D. Allain, Y. Amigues, L. Bodin et al., Détection de QTL influençant des caractères d'importance économique présente ou à venir en ovins laitiers en France et en Italie, Renc. Rech. Rum, vol.10, pp.57-60, 2003.

F. Barillet, G. Baloche, G. Lagriffoul, H. Larroque, C. Robert-granié et al., Genomic selection in French Lacaune and Manech dairy sheep breeds: comparison of BLUP and GBLUP accuracies, Proc. 38 ème session d'ICAR, 2012.

F. Barillet, G. Baloche, D. Buisson, G. Lagriffoul, X. Aguerre et al., Genomic selection in French dairy sheep: main results and design to implement genomic breeding schemes. 39 th ICAR session, 2014.

F. Barillet, G. Baloche, D. Buisson, G. Lagriffoul, X. Aguerre et al., Sélection génomique en ovins laitiers en France : principaux résultats et conception pour la mise en place de schémas de sélection génomique, Renc. Rech. Rum, vol.21, pp.249-252, 2014.

F. Barillet, G. Lagriffoul, P. G. Marnet, H. Larroque, R. Rupp et al., Objectifs de sélection et stratégie raisonnée de mise en oeuvre à l'échelle des populations de brebis laitières françaises, 2016.

. Dossier and . Prod, Anim, vol.29, pp.19-40

D. Boichard, V. Ducrocq, and S. Fritz, Sustainable dairy cattle selection in the genomic era, J. Anim. Breed. Genet, vol.132, pp.135-143, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01194086

A. Bouquet and J. Juga, Integrating genomic selection into dairy cattle breeding programmes: a review, Animal, vol.7, pp.705-713, 2013.

S. R. Browning and B. L. Browning, Rapid and accurate haplotype phasing and missingdata inference for whole-genome association studies by use of localized haplotype clustering, Am. J. Hum. Genet, vol.81, pp.1084-1097, 2007.

D. Buisson, G. Lagriffoul, G. Baloche, X. Aguerre, P. Boulenc et al., Genomic breeding schemes in French Lacaune and Manech dairy sheep: design and expected genetic gain, Proc. World Congr. Genet. Appl. Livest. Prod, p.898, 2014.

A. Carta, M. G. Usai, T. Sechi, S. Miari, S. Sechi et al., Exploring the genetic variation between Sarda and Lacaune dairy sheep breeds by genome wide association study on economic traits, Proc. World Congr. Genet. Appl. Livest. Prod, p.339, 2014.

J. J. Colleau, S. Fritz, F. Guillaume, A. Baur, D. Dupassieux et al., Simulation des potentialités de la sélection génomique chez les bovins laitiers, INRA Prod. Anim, vol.28, pp.251-258, 2015.

P. Croiseau, A. Baur, D. Jonas, C. Hoze, J. Promp et al., A new Marker-Assisted BLUP genomic evaluation for French dairy breeds, Interbull Meet, 2015.

S. I. Duchemin, C. Colombani, A. Legarra, G. Baloche, H. Larroque et al., Genomic selection in the French Lacaune dairy sheep breed, J. Dairy Sci, vol.95, pp.2723-2733, 2012.
URL : https://hal.archives-ouvertes.fr/hal-02644688

V. Ducrocq, P. Croiseau, A. Baur, R. Saintilan, S. Fritz et al., Genomic evaluation using QTL information, Proc. World Congr. Genet. Appl. Livest. Prod, pp.1-6, 2014.
URL : https://hal.archives-ouvertes.fr/hal-01193914

S. Fritz, F. Guillaume, P. Croiseau, A. Baur, C. Hoze et al., Mise en place de la sélection génomique dans les 3 principales races françaises de bovins laitiers, Renc. Rech. Rum, vol.17, pp.455-458, 2010.

M. Gelé, S. Minéry, J. M. Astruc, P. Brunschwig, M. Ferrand-calmels et al., Phénotypage et génotypage à grande échelle de la composition fine des laits dans les filières bovine, ovine et caprine. In : PhénoFinlait : Phénotypage et génotypage pour la compréhension et la maîtrise de la composition fine du lait, Dossier, INRA Prod. Anim, vol.27, pp.255-268, 2014.

C. Idele, Groupe génétique du CNBL : Journées des 15 et 16 octobre 2014. Collection Résultats. Compte-rendu n° 00 15, vol.202, p.1, 2015.

J. Labatut, J. M. Astruc, F. Barillet, D. Boichard, V. Ducrocq et al., Implications organisationnelles de la sélection génomique chez les bovins et ovins laitiers en France : analyses et accompagnement, Phéno-Finlait : Phénotypage et génotypage pour la compréhension et la maîtrise de la composition fine du lait, vol.27, pp.303-316, 2014.

H. Larroque, F. Barillet, G. Baloche, J. M. Astruc, D. Buisson et al., Toward genomic breeding programs in French dairy sheep and goats, Proc.World Congr. Genet. Appl. Livest. Prod, p.332, 2014.

A. Legarra, I. Aguilar, and I. Misztal, A relationship matrix including full pedigree and genomic information, J. Dairy Sci, vol.92, pp.4656-4663, 2009.

A. Legarra, G. Baloche, F. Barillet, J. M. Astruc, C. Soulas et al., Within-and across-breed genomic predictions and genomic relationships for Western Pyrenees dairy sheep breeds Latxa, Manech, and Basco-Béarnaise, J. Dairy Sci, vol.97, pp.3200-3212, 2014.

E. Mäntysaari and M. Koivula, GEBV validation test revisited, Interbull Bull, vol.45, pp.1-5, 2012.

E. Mäntysaari, Z. Liu, and P. M. Van-raden, Interbull validation test for genomic evaluations, Interbull Bull, vol.41, pp.17-21, 2010.

T. H. Meuwissen, B. J. Hayes, and M. E. Goddard, Prediction of total genetic value using genome_wide dense marker maps, Genetics, vol.157, pp.1819-1829, 2001.

I. Misztal, S. Tsuruta, T. Strabel, B. Auvray, T. Druet et al., BLUPF90 and related programs (BGF90), Proc. 7 th WCGALP, p.7, 2002.

I. Misztal, A. Legarra, and I. Aguilar, Computing procedures for genetic evaluation including phenotypic, full pedigree, and genomic information, J Dairy Sci, vol.92, pp.4648-4655, 2009.

I. Misztal, S. Tsuruta, I. Aguilar, A. Legarra, P. M. Van-raden et al., Methods to approximate reliabilities in singlestep genomic evaluation, J. Dairy Sci, vol.96, pp.647-654, 2013.
URL : https://hal.archives-ouvertes.fr/hal-02646704

I. Misztal, Z. G. Vitezica, A. Legarra, I. Aguilar, and A. A. Swan, Unknown-parent groups in single-step genomic evaluation, J. Anim. Breed. Genet, vol.130, pp.252-258, 2013.
URL : https://hal.archives-ouvertes.fr/hal-02646669

C. Patry and V. Ducrocq, Evidence of biases in genetic evaluation due to genomic preselection in dairy cattle, J. Dairy Sci, vol.94, pp.1011-1020, 2011.

C. Robert-granié, B. Bonaïti, D. Boichard, and A. Barbat, Accounting for variance heterogeneity in French dairy cattle genetic evaluation, Livest. Prod. Sci, vol.60, pp.343-357, 1999.

C. Robert-granié, A. Legarra, and V. Ducrocq, Principes de base de la sélection génomique, INRA Prod. Anim, vol.24, pp.331-340, 2011.

R. Rupp, I. Palhière, C. Maroteau, G. Baloche, G. Sallé et al., Mapping QTL controlling milk somatic cell counts in sheep and goat support the polygenic architecture of mastitis resistance, Proc. World Congr. Genet. Appl. Livest. Prod, p.105, 2014.

L. R. Schaeffer, Strategy for applying genome-wide selection in dairy cattle, J. Anim. Breed. Genet, vol.123, pp.218-241, 2006.

F. Shumbusho, J. Raoul, J. M. Astruc, I. Palhière, and J. M. Elsen, Potential benefits of genomic selection on genetic gain of small ruminant breeding programs, J. Anim. Sci, vol.91, pp.3643-3656, 2013.
URL : https://hal.archives-ouvertes.fr/hal-02646766

F. Shumbusho, J. Raoul, J. M. Astruc, I. Palhière, S. Lemarié et al., Economic evaluation of genomic selection in small ruminants: a sheep meat breeding program, Animal, vol.8, pp.1-9, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01519160

P. G. Sullivan, MTEDC software available for standardized EDC calculations, Interbull Bull, vol.37, pp.78-81, 2007.

J. R. Thomasen, C. Egger-danner, A. Willam, B. Guldbrandtsen, M. S. Lund et al., Genomic selection strategies in a small dairy cattle population evaluated for genetic gain and profit, J. Dairy Sci, vol.97, pp.458-470, 2014.

P. M. Vanraden, Efficient methods to compute genomic predictions, J. Dairy Sci, vol.91, pp.4414-4423, 2008.