Tracking the microbiome functionality: focus on Propionibacterium species, Gut, vol.62, pp.1227-1235, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-01209448
Evaluation of the taxonomy of the Propionibacterium, Can J Microbiol, vol.11, pp.1185-91, 1968. ,
Algorithms for de novo short read assembly using de Bruijn graphs, Genome Res, vol.18, pp.821-830, 2008. ,
AGMIAL: implementing an annotation strategy for prokaryote genomes as a distributed system, Nucleic Acids Res, vol.34, pp.3533-3578, 2006. ,
URL : https://hal.archives-ouvertes.fr/hal-02665192
The Complete Genome of Propionibacterium freudenreichii CIRM-BIA1T, a Hardy Actinobacterium with Food and Probiotic Applications, PLoS ONE, vol.5, p.11748, 2010. ,
URL : https://hal.archives-ouvertes.fr/hal-01204238
Prediction of surface exposed proteins in Streptococcus pyogenes, with a potential application to other Gram-positive bacteria, Proteomics, vol.9, pp.61-73, 2009. ,
URL : https://hal.archives-ouvertes.fr/hal-02663676
Promising immunomodulatory effects of selected strains of dairy propionibacteria evidenced in vitro and in vivo, Appl Environ Microbiol, vol.76, pp.8259-64, 2010. ,
URL : https://hal.archives-ouvertes.fr/hal-00684731
S layer protein A of Lactobacillus acidophilus NCFM regulates immature dendritic cell and T cell functions, Proc Natl Acad Sci U S A, vol.105, pp.19474-19482, 2008. ,
URL : https://hal.archives-ouvertes.fr/hal-01454074
S-layer protein mediates the stimulatory effect of Lactobacillus helveticus MIMLh5 on innate immunity, Appl Environ Microbiol, vol.79, pp.1221-1252, 2013. ,
Identification of extracellular surface-layer associated proteins in Lactobacillus acidophilus NCFM, Microbiology, vol.159, pp.2269-82, 2013. ,
Surface proteins of Propionibacterium freudenreichii are involved in its antiinflammatory properties, J Proteomics, vol.113, pp.447-61, 2015. ,
URL : https://hal.archives-ouvertes.fr/hal-01209657
The neighbor-joining method: a new method for reconstructing phylogenetic trees, Mol Biol Evol, vol.4, pp.406-431, 1987. ,
Prospects for inferring very large phylogenies by using the neighbor-joining method, Proc Natl Acad Sci U S A, vol.101, pp.11030-11035, 2004. ,
Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods, Mol Biol Evol, vol.28, pp.2731-2740, 2011. ,
Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya, Proc Natl Acad Sci, vol.87, pp.4576-4585, 1990. ,
Proposal for a New Hierarchic Classification System, Actinobacteria classis nov, Int J Syst Bacteriol, vol.47, pp.479-91, 1997. ,
Bergey's Manual of Systematic Bacteriology, The Actinobacteria, vol.5, 2012. ,
An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa, Int J Syst Evol Microbiol, vol.59, pp.589-608, 2009. ,
Inter-and Intrageneric Relationships of the Genus Propionibacterium as Determined by 16S rRNA Sequences, Microbiology, vol.135, pp.2065-70, 1989. ,
, Necessary corrections to the Approved Lists of Bacterial Names according to Rule 40d (formerly Rule 46). Opinion 86, Judicial Commission of the International Committee on Systematics of Prokaryotes, vol.58, 1975.
Gene Ontology: tool for the unification of biology, Nat Genet, vol.25, pp.25-34, 2000. ,