D. A. Benson, I. Karsch-mizrachi, D. J. Lipman, J. Ostell, and E. W. Sayers, GenBank. Nucleic Acids Res, vol.39, pp.32-37, 2011.

P. W. Rose, B. Beran, C. Bi, W. F. Bluhm, D. Dimitropoulos et al., The RCSB Protein Data Bank: redesigned web site and web services, Nucleic Acids Res, vol.39, pp.392-401, 2011.

H. Parkinson, U. Sarkans, N. Kolesnikov, N. Abeygunawardena, T. Burdett et al., ArrayExpress update-an archive of microarray and high-throughput sequencing-based functional genomics experiments, Nucleic Acids Res, vol.39, pp.1002-1004, 2011.

D. Swarbreck, C. Wilks, P. Lamesch, T. Z. Berardini, M. Garcia-hernandez et al., The Arabidopsis Information Resource (TAIR): gene structure and function annotation, Nucleic Acids Res, vol.36, pp.1009-1014, 2008.

S. Tweedie, M. Ashburner, K. Falls, P. Leyland, P. Mcquilton et al., FlyBase: enhancing Drosophila Gene Ontology annotations, Nucleic Acids Res, vol.37, pp.555-559, 2009.

A. Rogers, I. Antoshechkin, T. Bieri, D. Blasiar, C. Bastiani et al., Nucleic Acids Res, vol.36, pp.612-617, 2007.

R. Knu¨ppel, P. Dietze, W. Lehnberg, K. Frech, and E. Wingender, TRANSFAC retrieval program: a network model database of eukaryotic transcription regulating sequences and proteins, J. Comput. Biol, vol.1, pp.191-198, 1994.

M. Scheer, A. Grote, A. Chang, I. Schomburg, C. Munaretto et al., BRENDA, the enzyme information system in 2011, Nucleic Acids Res, vol.39, pp.670-676, 2011.

A. Gaulton, L. J. Bellis, A. P. Bento, J. Chambers, M. Davies et al., ChEMBL: a large-scale bioactivity database for drug discovery, Nucleic Acids Res, vol.40, pp.1100-1107, 2012.

L. Salwinski, C. S. Miller, A. J. Smith, F. K. Pettit, J. U. Bowie et al., The Database of Interacting Proteins: 2004 update, Nucleic Acids Res, vol.32, pp.449-451, 2004.

K. Han, B. Park, H. Kim, J. Hong, and J. Park, HPID: the Human Protein Interaction Database, Bioinformatics, vol.20, pp.2466-2470, 2004.

B. Aranda, P. Achuthan, Y. Alam-faruque, I. Armean, A. Bridge et al., The IntAct molecular interaction database in 2010, Nucleic Acids Res, vol.38, pp.525-531, 2010.

A. Andreeva, D. Howorth, J. M. Chandonia, S. E. Brenner, T. J. Hubbard et al., Data growth and its impact on the SCOP database: new developments, Nucleic Acids Res, vol.36, pp.419-425, 2008.

A. L. Cuff, I. Sillitoe, T. Lewis, A. B. Clegg, R. Rentzsch et al., Extending CATH: increasing coverage of the protein structure universe and linking structure with function, Nucleic Acids Res, vol.39, pp.420-426, 2011.

A. Bairoch, The ENZYME database in 2000, Nucleic Acids Res, vol.28, pp.304-305, 2000.

, The Gene Ontology in 2010: extensions and refinements, Gene Ontology Consortium, vol.38, pp.331-335, 2010.

R. D. Finn, J. Mistry, J. Tate, P. Coggill, A. Heger et al., The Pfam protein families database, Nucleic Acids Res, vol.38, pp.211-222, 2010.
URL : https://hal.archives-ouvertes.fr/hal-01294685

R. L. Tatusov, N. D. Fedorova, J. D. Jackson, A. R. Jacobs, B. Kiryutin et al., The COG database: an updated version includes eukaryotes, BMC Bioinformatics, vol.4, p.41, 2003.

S. A. Forbes, N. Bindal, S. Bamford, C. Cole, C. Y. Kok et al., COSMIC: mining complete cancer genomes in the catalogue of somatic mutations in cancer, Nucleic Acids Res, vol.39, pp.945-950, 2011.

A. Bombarely, N. Menda, I. Y. Tecle, R. M. Buels, S. Strickler et al., The Sol Genomics Network (solgenomics.net): growing tomatoes using Perl, Nucleic Acids Res, vol.39, pp.1149-1155, 2011.

J. Mcentyre and D. Lipman, PubMed: bridging the information gap, CMAJ, vol.164, pp.1317-1319, 2001.

W. Koehler, A longitudinal study of Web pages continued: a report after six years, Informat. Res, vol.9, p.174, 2004.

T. W. Tan, J. C. Tong, A. K. Khan, M. De-silva, K. S. Lim et al., Advancing standards for bioinformatics activities: persistence, reproducibility, disambiguation and Minimum Information About a Bioinformatics investigation (MIABi), BMC Genomics, p.27, 2010.

A. Bateman, Nucleic Acids Res, vol.35, pp.1-2, 2007.

M. Y. Galperin and G. R. Cochrane, The 2011 Nucleic Acids Research Database Issue and the online Molecular Biology Database Collection, Nucleic Acids Res, vol.39, pp.1-6, 2011.

S. Pettifer, J. Ison, M. Kalas, D. Thorne, P. Mcdermott et al., The EMBRACE web service collection, Nucleic Acids Res, vol.38, pp.683-688, 2010.
URL : https://hal.archives-ouvertes.fr/in2p3-00573748

M. Kalas, P. Puntervoll, A. Joseph, E. Bartaseviciute, A. To¨pfer et al., BioXSD: the common data-exchange format for everyday bioinformatics web services, Bioinformatics, vol.26, pp.540-546, 2010.

J. D. Tenenbaum, P. L. Whetzel, K. Anderson, C. D. Borromeo, I. D. Dinov et al., The Biomedical Resource Ontology (BRO) to enable resource discovery in clinical and translational research, J. Biomed. Inform, vol.44, pp.137-145, 2011.

J. Bhagat, F. Tanoh, E. Nzuobontane, T. Laurent, J. Orlowski et al., BioCatalogue: a universal catalogue of web services for the life sciences, Nucleic Acids Res, vol.38, pp.689-694, 2010.

P. Gaudet, A. Bairoch, D. Field, S. Sansone, C. Taylor et al., Towards BioDBcore: a community-defined information specification for biological databases, Nucleic Acids Res, vol.39, pp.7-10, 2011.

Y. B. Chen, A. Chattopadhyay, P. Bergen, C. Gadd, and N. Tannery, The Online Bioinformatics Resources Collection at the University of Pittsburgh Health Sciences Library System-a one-stop gateway to online bioinformatics databases and software tools, Nucleic Acids Res, vol.35, pp.780-785, 2007.

P. Romano, O. Aresu, M. Manniello, and B. Parodi, Interoperability of CABRI Services and Biochemical Pathways Databases, Comp. Funct. Genomics, vol.5, pp.169-172, 2004.

V. Atlamazoglou, T. Thireou, Y. Hamodrakas, and G. Spyrou, MetaBasis: a web-based database containing metadata on software tools and databases in the field of bioinformatics, Appl. Bioinformatics, vol.5, pp.187-192, 2006.

Y. Yamamoto and T. Takagi, OReFiL: an online resource finder for life sciences, BMC Bioinformatics, vol.8, p.287, 2007.