The regulatory genome. Gene regulatory networks in development and evolution, vol.289, 2006. ,
Gene regulation for higher cells: a theory, Science, vol.165, pp.349-357, 1969. ,
Repetitive and non-repetitive DNA sequences and a speculation on the origins of evolutionary novelty, Q Rev Biol, vol.46, pp.111-138, 1971. ,
A distal enhancer and an ultraconserved exon are derived from a novel retroposon, Nature, vol.441, pp.87-90, 2006. ,
Transposable elements and the evolution of regulatory networks, Nat Rev Genet, vol.9, pp.397-405, 2008. ,
Largescale genetic fine mapping and genotype-phenotype associations implicate polymorphism in the IL2RA region in type 1 diabetes, Nat Genet, vol.39, pp.1074-1082, 2007. ,
DNA transposons and the evolution of eukaryotic genomes, Annu Rev Genet, vol.41, pp.331-368, 2007. ,
Transposable elements donate lineage-specific regulatory sequences to host genomes, Cytogenet Genome Res, vol.110, pp.333-341, 2005. ,
Transposable elements in mammals promote regulatory variation and diversification of genes with specialized functions, Trends Genet, vol.19, pp.530-536, 2003. ,
Transposable element derived DNaseIhypersensitive sites in the human genome, Biol Direct, vol.1, p.20, 2006. ,
Sex chromosomes: evolution of the weird and wonderful, Curr Biol, vol.15, pp.129-131, 2005. ,
Regulatory putsches create new ways of determining sexual development, EMBO Rep, 2008. ,
URL : https://hal.archives-ouvertes.fr/hal-02662220
Masters change, slaves remain, Bioessays, vol.25, pp.1-4, 2003. ,
Evidence for evolutionary conservation of sex-determining genes, Nature, vol.391, pp.691-695, 1998. ,
A region of human chromosome 9p required for testis development contains two genes related to known sexual regulators, Hum Mol Genet, vol.8, pp.989-996, 1999. ,
300 million years of conserved synteny between chicken Z and human chromosome 9, Nat Genet, vol.21, pp.258-259, 1999. ,
DMRT1 in a ratite bird: evidence for a role in sex determination and discovery of a putative regulatory element, Cytogenet Genome Res, vol.99, pp.245-251, 2002. ,
DMY is a Y-specific DM-domain gene required for male development in the medaka fish, Nature, vol.417, pp.559-563, 2002. ,
A duplicated copy of DMRT1 in the sex-determining region of the Y chromosome of the medaka, Oryzias latipes, Proc Natl Acad Sci U S A, vol.99, pp.11778-11783, 2002. ,
A Wlinked DM-domain gene, DM-W, participates in primary ovary development in Xenopus laevis, Proc Natl Acad Sci U S A, vol.105, pp.2469-2474, 2008. ,
DMY gene induces male development in genetically female (XX) medaka fish, Proc Natl Acad Sci U S A, vol.104, pp.3865-3870, 2007. ,
Sex determination in the teleost medaka, Oryzias latipes, Annu Rev Genet, vol.39, pp.293-307, 2005. ,
Vertebrate sex determination: a new player in the field, Curr Biol, vol.12, pp.602-603, 2002. ,
Signaling at the crossroads of gonad development, Trends Endocrinol Metab, vol.16, pp.19-25, 2005. ,
Sex determination and SRY: down to a wink and a nudge?, Trends Genet, vol.25, pp.19-29, 2009. ,
Sex determination and gonadal development in mammals, Physiol Rev, vol.87, pp.1-28, 2007. ,
Sex determination involves synergistic action of SRY and SF1 on a specific Sox9 enhancer, Nature, vol.453, pp.930-934, 2008. ,
Subfunctionalization of duplicated zebrafish pax6 genes by cis-regulatory divergence, PLoS Genet, vol.4, p.29, 2008. ,
Comparative genomics using Fugu reveals insights into regulatory subfunctionalization, Genome Biol, vol.8, p.53, 2007. ,
Genomic organization of the sex-determining and adjacent regions of the sex chromosomes of medaka, Genome Res, vol.16, pp.815-826, 2006. ,
Developmental gene regulatory networks in the zebrafish embryo, Biochim Biophys Acta, vol.1789, pp.279-298, 2009. ,
Genomic organization and expression of the doublesex-related gene cluster in vertebrates and detection of putative regulatory regions for DMRT1, Genomics, vol.77, pp.8-17, 2001. ,
A unified classification system for eukaryotic transposable elements, Nat Rev Genet, vol.8, pp.973-982, 2007. ,
URL : https://hal.archives-ouvertes.fr/hal-00169819
The THAP domain: a novel protein motif with similarity to the DNA-binding domain of P element transposase, Trends Biochem Sci, vol.28, pp.66-69, 2003. ,
The implications of DNA transposons in the evolution of P elements in zebrafish (Danio rerio), Genomics, vol.88, pp.572-579, 2006. ,
Homologs of Drosophila P transposons were mobile in zebrafish but have been domesticated in a common ancestor of chicken and human, Mol Biol Evol, vol.22, pp.833-844, 2005. ,
Recurrent recruitment of the THAP DNA-binding domain and molecular domestication of the P-transposable element, Mol Biol Evol, vol.22, pp.741-746, 2005. ,
URL : https://hal.archives-ouvertes.fr/hal-02683097
Molecular cloning, expression of Sox5 and its down-regulation of Dmrt1 transcription in zebrafish, J Exp Zoolog B Mol Dev Evol, vol.304, pp.476-483, 2005. ,
Porcine SRY promoter is a target for steroidogenic factor 1, Biol Reprod, vol.68, pp.1098-1106, 2003. ,
Vertebrate DM domain proteins bind similar DNA sequences and can heterodimerize on DNA, BMC Mol Biol, vol.8, p.58, 2007. ,
Evolutionary origin of the medaka Y chromosome, Curr Biol, vol.14, pp.1664-1669, 2004. ,
Two DM domain genes, DMY and DMRT1, involved in testicular differentiation and development in the medaka, Oryzias latipes, Dev Dyn, vol.231, pp.518-526, 2004. ,
Expression of the male determining gene dmrt1bY and its autosomal coorthologue dmrt1a in medaka, Sex Dev, vol.1, pp.197-206, 2007. ,
URL : https://hal.archives-ouvertes.fr/hal-02658005
A highly conserved cis-regulatory motif directs differential gonadal synexpression of Dmrt1 transcripts during gonad development, Nucleic Acids Res, vol.37, pp.1510-1520, 2009. ,
URL : https://hal.archives-ouvertes.fr/hal-02666631
Gene and genome duplications in vertebrates: the one-to-four (-to-eight in fish) rule and the evolution of novel gene functions, Curr Opin Cell Biol, vol.11, pp.699-704, 1999. ,
From 2R to 3R: evidence for a fish-specific genome duplication (FSGD), Bioessays, vol.27, pp.937-945, 2005. ,
Subfunction partitioning, the teleost radiation and the annotation of the human genome, Trends Genet, vol.20, pp.481-490, 2004. ,
Genome evolution: sex and the transposable element, Curr Biol, vol.11, pp.296-299, 2001. ,
VISTA: computational tools for comparative genomics, Nucleic Acids Res, vol.32, pp.273-279, 2004. ,
Glocal alignment: finding rearrangements during alignment, Bioinformatics, vol.19, pp.54-62, 2003. ,
BioEdit: a user -friendly biological sequence alignment editor and analysis program for Windows 95/98/NT, Nucl Acids Symp, vol.41, pp.95-98, 1999. ,
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0, Mol Biol Evol, vol.24, pp.1596-1599, 2007. ,
Expression cloning of Siamois, a Xenopus homeobox gene expressed in dorsal-vegetal cells of blastulae and able to induce a complete secondary axis, Cell, vol.81, pp.85-94, 1995. ,
Molecular characterization of three gonad cell lines, Cytogenet Genome Res, vol.101, pp.242-249, 2003. ,
Establishment of a normal medakafish spermatogonial cell line capable of sperm production in vitro, Proc Natl Acad Sci U S A, vol.101, pp.8011-8016, 2004. ,
Fish cell culture: Establishment of two fibroblast-like cell lines (OL-17 and OL-32) from fins of the medaka, Oryzias latipes, In Vitro Cellular & Developmental Biology, vol.24, pp.294-298, 1988. ,
Cell cultures derived from embryos and melanoma of poeciliid fish, In Vitro, vol.15, pp.537-544, 1979. ,
Set of optimized luciferase reporter gene plasmids compatible with widely used CAT vectors, Biotechniques, vol.23, pp.436-438, 1997. ,
) I-SceI meganuclease mediates highly efficient transgenesis in fish, Mech Dev, vol.118, pp.91-98, 2002. ,
Isolation of DNA suitable for PCR for field and laboratory work, Biotechniques, vol.23, pp.228-229, 1997. ,
Inhibition of primordial germ cell proliferation by the medaka male determining gene Dmrt I bY, BMC Dev Biol, vol.7, p.99, 2007. ,
Generation of transgenic medaka using modified bacterial artificial chromosome, Dev Growth Differ, vol.50, pp.415-419, 2008. ,