Accéder directement au contenu Accéder directement à la navigation
Article dans une revue

Characterization of 41 microsatellite loci developed from the genome sequence of the poplar rust fungus, Melampsora larici-populina

Abstract : Forty-one microsatellite markers were developed for the poplar rust fungus Melampsora larici-populina. The genome sequence of M. larici-populina strain 98AG31 was screened in silico for microsatellite loci using Magellan software. Thirty-nine loci, evaluated on a sexual population of 35 M. larici-populina isolates sampled on larch trees in the French Alps, were identified to be highly polymorphic. These markers revealed two to 34 alleles, with an average of 7.23 alleles per locus. The estimated heterozygosity ranged from 0.029 to 0.958 across the 41 microsatellite loci. These markers will be highly useful for population genetics studies of M. larici-populina.
Type de document :
Article dans une revue
Liste complète des métadonnées

https://hal.inrae.fr/hal-02667477
Déposant : Migration Prodinra <>
Soumis le : dimanche 31 mai 2020 - 10:45:00
Dernière modification le : vendredi 5 février 2021 - 03:39:49

Identifiants

Collections

Citation

Constance Xhaard, Axelle Andrieux, Fabien Halkett, Pascal Frey. Characterization of 41 microsatellite loci developed from the genome sequence of the poplar rust fungus, Melampsora larici-populina. Conservation Genetics Resources, Springer, 2009, 1 (1), pp.21-25. ⟨10.1007/s12686-009-9005-z⟩. ⟨hal-02667477⟩

Partager

Métriques

Consultations de la notice

12