C. Beaumont, H. Chapuis, J. Protais, N. Sellier, P. Menanteau et al., Resistance to Salmonella carrier state: selection may be efficient but response depends on animal's age, Genet Res (Camb), vol.91, pp.161-169, 2009.

A. Berchieri, P. Wigley, K. Page, C. K. Murphy, and P. A. Barrow, Further studies on vertical transmission and persistence of Salmonella enterica serovar Enteritidis phage type 4 in chickens, Avian Pathol, vol.30, pp.297-310, 2001.

C. R. Braden, Salmonella enterica serotype Enteritidis and eggs: a national epidemic in the United States, Clin Infect Dis, vol.43, pp.512-517, 2006.

S. Brugiroux, M. Beutler, C. Pfann, D. Garzetti, H. J. Ruscheweyh et al., Genome-guided design of a defined mouse microbiota that confers colonization resistance against Salmonella enterica serovar Typhimurium, Nat Microbiol, vol.2, p.16215, 2016.

J. A. Byrd, R. C. Anderson, T. R. Callaway, R. W. Moore, K. D. Knape et al., Effect of experimental chlorate product administration in the drinking water on Salmonella Typhimurium contamination of broilers, Poult Sci, vol.82, pp.1403-1406, 2003.

F. Calenge, P. Kaiser, A. Vignal, and C. Beaumont, Genetic control of resistance to salmonellosis and to Salmonella carrier-state in fowl: a review, Genet Sel Evol, vol.42, p.11, 2010.
URL : https://hal.archives-ouvertes.fr/hal-02663835

T. R. Callaway, R. C. Anderson, T. S. Edrington, K. J. Genovese, R. B. Harvey et al., Recent pre-harvest supplementation strategies to reduce carriage and shedding of zoonotic enteric bacterial pathogens in food animals, Anim Health Res Rev, vol.5, pp.35-47, 2004.

P. G. Casey, G. E. Gardiner, G. Casey, B. Bradshaw, P. G. Lawlor et al., A five-strain probiotic combination reduces pathogen shedding and alleviates disease signs in pigs challenged with Salmonella enterica Serovar Typhimurium, Appl Environ Microbiol, vol.73, pp.1858-1863, 2007.

Y. Chimalizeni, K. Kawaza, and E. Molyneux, The epidemiology and management of non typhoidal Salmonella infections, Adv. Exp. Med. Biol, vol.659, pp.33-46, 2010.

I. Cho and M. J. Blaser, The human microbiome: at the interface of health and disease, Nat Rev Genet, vol.13, pp.260-270, 2012.

J. L. Danzeisen, H. B. Kim, R. E. Isaacson, Z. J. Tu, and T. J. Johnson, Modulations of the chicken cecal microbiome and metagenome in response to anticoccidial and growth promoter treatment, PLoS ONE, vol.6, 2011.

M. C. Dao, A. Everard, J. Aron-wisnewsky, N. Sokolovska, E. Prifti et al., Akkermansia muciniphila and improved metabolic health during a dietary intervention in obesity: relationship with gut microbiome richness and ecology, Gut, vol.65, pp.426-436, 2016.
URL : https://hal.archives-ouvertes.fr/hal-02639895

E. Efsa and E. , The European Union summary report on trends and sources ofzoonoses, zoonotic agents and food-borne outbreaks in 2016, EFSA Journal, vol.15, p.pp, 2017.

N. Foster, A. Berndt, A. C. Lalmanach, U. Methner, P. Pasquali et al., Emergency and therapeutic vaccination--is stimulating innate immunity an option?, Res Vet Sci, vol.93, pp.7-12, 2012.
URL : https://hal.archives-ouvertes.fr/hal-02651827

M. Galtier, L. De-sordi, D. Maura, H. Arachchi, S. Volant et al., Bacteriophages to reduce gut carriage of antibiotic resistant uropathogens with low impact on microbiota composition, Environmental microbiology, vol.18, pp.2237-2245, 2016.
URL : https://hal.archives-ouvertes.fr/pasteur-01538960

M. Guibourdenche, P. Roggentin, M. Mikoleit, P. I. Fields, J. Bockemuhl et al., 47) to the White-Kauffmann-Le Minor scheme, Res Microbiol, vol.161, pp.26-29, 2003.
URL : https://hal.archives-ouvertes.fr/pasteur-02019334

Z. Han, T. Willer, L. Li, C. Pielsticker, I. Rychlik et al., Influence of the Gut Microbiota Composition on Campylobacter jejuni Colonization in Chickens, Infect. Immun, vol.85, 2017.
URL : https://hal.archives-ouvertes.fr/hal-02620221

R. M. Hayashi, M. C. Lourenco, A. L. Kraieski, R. B. Araujo, R. Gonzalez-esquerra et al.,

A. F. Cunha, M. F. Carazzolle, P. S. Monzani, and E. Santin, Effect of Feeding Bacillus subtilis Spores to Broilers Challenged with Salmonella enterica serovar Heidelberg Brazilian Strain UFPR1 on Performance, Immune Response, and Gut Health, Front Vet Sci, vol.5, p.13, 2018.

N. Kamada, Y. G. Kim, H. P. Sham, B. A. Vallance, J. L. Puente et al., Regulated virulence controls the ability of a pathogen to compete with the gut microbiota, Science, vol.336, pp.1325-1329, 2012.

B. Kaspers, S. Lettmann, S. Röll, C. Schouler, and P. Velge, La colonisation bactérienne est essentielle pour le développement du système immunitaire intestinal du poulet. 12 eme Journées de la Recherche avicole et palmipèdes à foie gras Tours avril, 2017.

N. Kraimi, L. Calandreau, M. Biesse, S. Rabot, E. Guitton et al., Absence of gut microbiota reduces emotional reactivity in Japanese quails (Coturnix japonica), Frontiers in Physiology, 2018.
URL : https://hal.archives-ouvertes.fr/hal-02625096

L. Hello, S. Harrois, D. Bouchrif, B. Sontag, L. Elhani et al., Highly drug-resistant Salmonella enterica serotype Kentucky ST198-X1: a microbiological study. The Lancet infectious diseases, 2013.
URL : https://hal.archives-ouvertes.fr/pasteur-01109890

P. Menanteau, F. Kempf, J. Trotereau, I. Virlogeux-payant, E. Guitton et al., Role of systemic infection, cross contaminations and super-shedders in Salmonella carrier state, 2018.
URL : https://hal.archives-ouvertes.fr/hal-02628240

S. Mondot, T. De-wouters, J. Dore, and P. Lepage, The human gut microbiome and its dysfunctions, Dig. Dis, vol.31, pp.278-285, 2013.
URL : https://hal.archives-ouvertes.fr/hal-01204289

A. P. Neumann and G. Suen, Differences in major bacterial populations in the intestines of mature broilers after feeding virginiamycin or bacitracin methylene disalicylate, J Appl Microbiol, vol.119, pp.1515-1526, 2015.

L. Nuotio, C. Schneitz, U. Halonen, and E. Nurmi, Use of competitive exclusion to protect newlyhatched chicks against intestinal colonisation and invasion by Salmonella enteritidis PT4, Br Poult Sci, vol.33, pp.775-779, 1992.

C. K. Okoro, R. A. Kingsley, T. R. Connor, S. R. Harris, C. M. Parry et al., Intracontinental spread of human invasive Salmonella Typhimurium pathovariants in sub-Saharan Africa, Nat. Genet, vol.44, pp.1215-1221, 2012.

D. Pan and Z. Yu, Intestinal microbiome of poultry and its interaction with host and diet, Gut Microbes, vol.5, issue.1, pp.108-119, 2014.

A. Pedroso, S. Collett, A. Hurley-bacon, A. Zedek, and M. Lee, The Potential of Antibiotic Alternatives for Enriching Beneficial Microbiota in Litter, SOJ Microbiol Infect Dis, vol.2, pp.1-11, 2014.

L. Revolledo, C. S. Ferreira, and A. J. Ferreira, Prevention of Salmonella Typhimurium colonization and organ invasion by combination treatment in broiler chicks, Poult Sci, vol.88, pp.734-743, 2009.

J. R. Sadeyen, J. Trotereau, P. Velge, J. Marly, C. Beaumont et al., Salmonella carrier state in chicken: comparison of expression of immune response genes between susceptible and resistant animals, Microbes Infect, vol.6, pp.1278-1286, 2004.
URL : https://hal.archives-ouvertes.fr/hal-02673601

A. Schikora, A. V. Garcia, and H. Hirt, Plants as alternative hosts for Salmonella, Trends in plant science, vol.17, pp.245-249, 2012.
URL : https://hal.archives-ouvertes.fr/hal-02648576

A. Schikora, I. Virlogeux-payant, E. Bueso, A. V. Garcia, T. Nilau et al., Conservation of Salmonella infection mechanisms in plants and animals, PLoS ONE, vol.6, p.24112, 2011.
URL : https://hal.archives-ouvertes.fr/hal-02648976

I. Szabo, L. H. Wieler, K. Tedin, L. Scharek-tedin, D. Taras et al., Influence of a probiotic strain of Enterococcus faecium on Salmonella enterica serovar Typhimurium DT104 infection in a porcine animal infection model, Appl Environ Microbiol, vol.75, pp.36-41, 2009.

T. S. Tran, C. Beaumont, N. Salmon, M. Fife, P. Kaiser et al., A maximum likelihood QTL analysis reveals common genome regions controlling resistance to Salmonella colonization and carrier-state, BMC genomics, vol.13, 0198.
URL : https://hal.archives-ouvertes.fr/hal-02648110

D. Van-cauteren, L. Strat, Y. Sommen, C. Bruyand, M. Tourdjman et al., Estimated Annual Numbers of Foodborne Pathogen-Associated Illnesses, Hospitalizations, and Deaths, Emerg Infect Dis, vol.23, pp.1486-1492, 2008.

F. Van-immerseel, D. Buck, J. Boyen, F. Bohez, L. Pasmans et al., Medium-chain fatty acids decrease colonization and invasion through hilA suppression shortly after infection of chickens with Salmonella enterica serovar Enteritidis, Appl Environ Microbiol, vol.70, pp.3582-3587, 2004.

F. Van-immerseel, U. Methner, I. Rychlik, B. Nagy, P. Velge et al., Vaccination and early protection against non-host-specific Salmonella serotypes in poultry: exploitation of innate immunity and microbial activity, Epidemiol Infect, vol.133, pp.959-978, 2005.
URL : https://hal.archives-ouvertes.fr/hal-02671200

P. Velge, A. Cloeckaert, and P. Barrow, Emergence of Salmonella epidemics: the problems related to Salmonella enterica serotype Enteritidis and multiple antibiotic resistance in other major serotypes, Vet Res, vol.36, pp.267-288, 2005.
URL : https://hal.archives-ouvertes.fr/hal-02676418

J. Volf, O. Polansky, K. Varmuzova, L. Gerzova, Z. Sekelova et al., Transient and Prolonged Response of Chicken Cecum Mucosa to Colonization with Different Gut Microbiota, PLoS ONE, vol.11, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01381919

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