G. R. Brown, G. P. Gill, R. Kuntz, C. H. Langley, and N. Db, Nucleotide diversity and linkage disequilibrium in loblolly pine, Proceedings of the National Academy of Sciences of the USA, vol.42, pp.15255-15260, 2004.

R. T. Brumfield, P. Beerli, D. A. Nickerson, and S. V. Edwards, The utility of single nucleotide polymorphisms in inference of population history, Trends in Ecology and Evolution, vol.18, pp.249-256, 2003.

A. Ching, K. S. Caldwell, M. Young, M. Dolan, O. Smith et al., SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines, BMC Genetics, vol.3, p.19, 2002.

L. Comai, K. Young, B. J. Till, S. H. Reynolds, E. A. Greene et al., Efficient discovery of DNA polymorphisms in natural populations by ecotilling, The Plant Journal, vol.37, pp.778-786, 2004.

M. M. Cordonnier-pratt, C. Liang, H. Wang, D. S. Kolychev, F. Sun et al., MAGIC Database and interfaces: an integrated package for gene discovery and expression, Comparative and Functional Genomics, vol.5, pp.268-275, 2004.

E. De-paoli and M. Morgante, Association study for timing of bud set in Picea abies, p.70, 2004.

V. Dvornik, A. Sirviö, M. Mikkonen, and O. Savolainen, Low nucleotide diversity at the palI locus in the widely distributed Pinus sylvestris, Molecular Biology and Evolution, vol.19, pp.179-188, 2002.

M. R. García-gil, M. Mikkonen, and O. Savolainen, Nucleotide diversity at two phytochrome loci along a latitudinal cline in Pinus sylvestris, Molecular Ecology, vol.12, pp.1195-1206, 2003.

J. N. Hirschhorn and M. J. Daly, Genome-wide association studies for common diseases and complex traits, Nature Reviews Genetics, vol.6, pp.95-108, 2005.

P. K. Ingvarsson, Nucleotide polymorphism and linkage disequilibrium within and among natural populations of European Aspen (Populus tremula L., Salicaceae), Genetics, vol.169, pp.945-953, 2005.

P. Järvinen, J. Lemmetyinen, O. Savolainen, and T. Sopanen, DNA sequence variation in BpMADS2 gene in two populations of Betula pendula, Molecular Ecology, vol.12, pp.369-384, 2003.

D. E. Jelinski and W. M. Cheliak, Genetic diversity and spatial subdivision of Populus tremuloides (Salicaceae) in a heterogeneous landscape, American Journal of Botany, vol.79, pp.728-736, 1992.

T. Kado, H. Yoshimaru, Y. Tsumura, and H. Tachida, DNA variation in a conifer, Cryptomeria japonica (Cupressaceae sensu lato), Genetics, vol.164, pp.1547-1559, 2003.

K. V. Krutovsky and N. D. , Forest genomics for conserving adaptive genetic diversity. Forest Genetic Resources Working Papers FGR/3. FAO, Rome, p.3, 2001.

K. V. Krutovsky and N. Db, Nucleotide diversity and linkage disequilibrium in cold hardiness and wood quality related candidate genes in Douglas-fir, Genetics, vol.171, pp.2029-2041, 2005.

P. Y. Kwok, Methods for genotyping single nucleotide polymorphism, Annual Review Genomics Human Genetics, vol.2, pp.235-258, 2001.

L. Dantec, L. Chagné, D. Pot, D. Cantin, O. Garnier-géré et al., Automated SNP detection in expressed sequence tags: statistical considerations and application to maritime pine sequences, Plant Molecular Biology, vol.54, pp.461-470, 2004.
URL : https://hal.archives-ouvertes.fr/hal-00306578

J. Z. Lin, P. L. Morrell, and M. T. Clegg, The influence of linkage and inbreeding on patterns of nucleotide sequence diversity at duplicate alcohol deydrogenase loci in wild barley (Hordeum vulgare subsp. spontaneum), Genetics, vol.162, pp.2007-2015, 2002.

G. Luikart, P. England, D. Tallmon, J. S. Taberlet, and P. , The power and promise of population genomics: From genotyping to genome typing, Nature Reviews Genetics, vol.4, pp.981-994, 2003.
URL : https://hal.archives-ouvertes.fr/halsde-00279787

P. A. Morin, G. Luikart, and W. Rk, SNPs in ecology, evolution and conservation, Trends in Ecology and Evolution, vol.19, pp.208-2169, 2004.

D. Neale and O. Savolainen, Association genetics of complex traits in conifers, Trends in Plant Science, vol.9, pp.325-330, 2004.

M. Nordborg and S. Tavaré, Linkage disequilibrium: what history has to tell us, Trends in Genetics, vol.18, pp.83-90, 2002.

R. J. Petit, N. Bahrman, and P. Baradat, Comparison of genetic differentiation in maritime pine (Pinus pinaster Ait.) estimated using isozyme, total protein and terpenic loci, Heredity, vol.75, pp.382-389, 1995.

S. Pflieger, V. Lefebvre, and M. Causse, The candidate gene approach in plant genetics: a review, Molecular Breeding, vol.7, pp.275-291, 2001.
URL : https://hal.archives-ouvertes.fr/hal-02681845

C. Plomion, J. Cooke, T. Richardson, J. Mackay, and G. Tuskan, Report on the forest trees workshop at the plant and animal genome conference, Comparative and Functional Genomics, vol.4, pp.229-238, 2003.
URL : https://hal.archives-ouvertes.fr/hal-02828223

D. Pot, L. Mcmillan, C. Echt, L. Provost, G. Garnier-géré et al., Nucleotide variation in genes involved in wood formation in two pine species, New Phytologist, vol.167, pp.101-112, 2005.

A. J. Rafalski, Applications of single nucleotide polymorphisms in crop genetics, Current Opinion in Plant Biology, vol.5, pp.94-100, 2002.

A. J. Rafalski, Novel genetic mapping tools in plants: SNPs and LD-based approaches, Plant Science, vol.162, pp.329-333, 2002.

D. L. Remington, J. M. Thornsberry, Y. Matsuoka, L. M. Wilson, S. R. Whitt et al., Structure of linkage disequilibrium and phenotypic associations in the maize genome, Proceedings of the National Academy of Sciences of the USA, vol.98, pp.11479-11484, 2001.

K. Schneider, B. Weisshaar, D. C. Borchardt, and F. Salamini, SNP frequency and allelic haplotype structure of Beta vulgaris expressed genes, Molecular Breeding, vol.8, pp.63-74, 2001.

P. H. Van-tienderen, A. A. De-haan, C. G. Van-der-linden, and B. Vosman, Biodiversity assessment using markers for ecologically important traits, Trends in Ecology and Evolution, vol.17, pp.577-582, 2002.

G. Zaina and M. Morgante, Nucleotide diversity and linkage disequilibrium in Populus nigra, p.67, 2004.

Y. L. Zhu, Q. J. Song, D. L. Hyten, C. P. Van-tassel, L. K. Matukumalli et al., Single-nucleotide polymorphisms in soybean, Genetics, vol.163, pp.1123-1134, 2003.