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Xanthomonas bonasiae sp. nov. and Xanthomonas youngii sp. nov., isolated from crown gall tissues Hamzeh Mafakheri 2429737-0 S. Mohsen Taghavi 1870582-0 Sadegh Zarei 1870584-0 Perrine Portier d4b04bb1c61e25b46bf7b51c5f8b0a30 inrae.fr perrine-portier 22121 190598-22121 https://orcid.org/0000-0003-1033-6731 https://www.idref.fr/084137843 Ivica Dimkić 2429739-0 Ralf Koebnik c16e9725fe204c3ddff8ac943ff17ff3 ird.fr ralf-koebnik 753637 4844-753637 http://www.researcherid.com/rid/J-5627-2014 https://orcid.org/0000-0002-4419-0542 https://www.idref.fr/150035969 http://www.researcherid.com/rid/http://www.researcherid.com/rid/J-5627-2014 Nemanja Kuzmanović 1790079-0 Ebrahim Osdaghi 800738 1444095-800738 https://orcid.org/0000-0002-0359-0398 Olivier DUPRE 5d9a6f42ffdc2a2283eba98eba505197 inrae.fr Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Projektnummer 429677233. I.D. ; Ministry of Education, Science and Technological Development of the Republic of Serbia and INTERREG ADRION OIS-AIR (Open Innovation System of the Adriatic-Ionian Region) (contract no. 451-03-9/2021-14/200178). and OIS-AIR 77). Iranian Ministry of Science and Technology for a 6 months fellowship at the University of Tehran, Iran. 2022-07-20 11:34:23 2025-12-18 16:51:39 2022-07-20 11:34:23 2022-06-09 0 inra_etatDocument_local_0 Scientists contributor Olivier DUPRE 5d9a6f42ffdc2a2283eba98eba505197 inrae.fr CCSD hal-03728267 https://hal.inrae.fr/hal-03728267 mafakheri:hal-03728267 <i>International Journal of Systematic and Evolutionary Microbiology</i>, 2022, 72 (6), pp.005418. <a target="_blank" href="https://dx.doi.org/10.1099/ijsem.0.005418">⟨10.1099/ijsem.0.005418⟩</a> International Journal of Systematic and Evolutionary Microbiology, 2022, 72 (6), pp.005418. ⟨10.1099/ijsem.0.005418⟩ CIRAD - Centre de coopération internationale en recherche agronomique pour le développement Université d'Angers Archive ouverte en agrobiosciences Université de Montpellier Institut Agro Montpellier Institut de Recherche en Horticulture et Semences Institut National de Recherche en Agriculture, Alimentation et Environnement INRAE Occitanie Montpellier Université de Montpellier (2015-2021) Université de Montpellier - EPE Réseau "Systèmes Agricoles et Eau" Département Santé des Plantes et Environnement (SPE) Institut Agro Plant Health Institute of Montpellier International No Yes Xanthomonas bonasiae sp. nov. and Xanthomonas youngii sp. nov., isolated from crown gall tissues Hamzeh Mafakheri 2429737-0 S. Mohsen Taghavi 1870582-0 Sadegh Zarei 1870584-0 Perrine Portier d4b04bb1c61e25b46bf7b51c5f8b0a30 inrae.fr perrine-portier 22121 190598-22121 https://orcid.org/0000-0003-1033-6731 https://www.idref.fr/084137843 Ivica Dimkić 2429739-0 Ralf Koebnik c16e9725fe204c3ddff8ac943ff17ff3 ird.fr ralf-koebnik 753637 4844-753637 http://www.researcherid.com/rid/J-5627-2014 https://orcid.org/0000-0002-4419-0542 https://www.idref.fr/150035969 http://www.researcherid.com/rid/http://www.researcherid.com/rid/J-5627-2014 Nemanja Kuzmanović 1790079-0 Ebrahim Osdaghi 800738 1444095-800738 https://orcid.org/0000-0002-0359-0398 Erist Angers, INRAE Pays de la Loire, IRHS, DOCANG-2022/40 14732 1466-5026 1466-5034 International Journal of Systematic and Evolutionary Microbiology Microbiology Society 72 6 005418 2022-06-09 10.1099/ijsem.0.005418 35679152 000884756300007 English crown gall Iran plant pathogen Xanthomonadacea. Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology cecidia crown gall plant pathogen Xanthomonas plant disease resistance to bacteria Journal articles Journal articles Journal articles

The genus Xanthomonas contains a set of diverse bacterial strains, most of which are known for their pathogenicity on annual crops and fruit trees causing economically important plant diseases. Recently, five Xanthomonas strains were isolated from Agrobacterium -induced crown gall tissues of amaranth ( Amaranthus sp.) and weeping fig ( Ficus benjamina ) plants in Iran. Phenotypic characteristics ( i.e . biochemical tests and pathogenicity features) and whole genome sequence-based core-genome phylogeny followed by average nucleotide identity and digital DNA–DNA hybridization calculations suggested that these gall-associated strains belong to two new species within the genus Xanthomonas . In this study, we provide a formal species description for these new species where Xanthomonas bonasiae sp. nov. is proposed for the strains isolated from weeping fig with FX4 T (=CFBP 8703 T =DSM 112530 T ) as type strain. The name Xanthomonas youngii sp. nov. is proposed for the strains isolated from amaranth with AmX2 T (=CFBP 8902 T =DSM 112529 T ) as type strain.

https://ror.org/028qtbk54 Shiraz University Shiraz University

Shiraz 13876, Iran

http://www.shirazu.ac.ir/en/ https://ror.org/05vf56z40 University of Tehran

16th Azar St., Enghelab Sq., Tehran

http://ut.ac.ir/en 073995266 0000 0004 0613 5301 201220383H https://ror.org/02xq0x374 Q30296202 Institut de Recherche en Horticulture et Semences IRHS 2022-01-01

Institut Agro Agrocampus Ouest, UMR1345 IRHS, F-49045 Angers, France

http://www6.angers-nantes.inra.fr/irhs https://ror.org/02qsmb048 University of Belgrade [Belgrade]

Studentski Trg 1, 11000 Belgrade

http://www.bg.ac.rs/en_index.php 257041931 202123745Y https://ror.org/05y5s3h28 Plant Health Institute of Montpellier UMR PHIM 2022-01-01

CIRAD Campus International de Baillarguet TA A-54/K34398 Montpellier

https://umr-phim.cirad.fr/ Julius Kühn-Institut - Federal Research Centre for Cultivated Plants JKI

Quedlinburg

https://www.julius-kuehn.de/ 026402920 0000000122483363 https://ror.org/04yrqp957 Université d'Angers UA 1971-10-25

Université d'Angers - 40 Rue de Rennes, BP 73532 - 49035 Angers CEDEX 01

http://www.univ-angers.fr/ https://ror.org/003vg9w96 Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement INRAE 2020-01-01

261039946 https://ror.org/01s3fs709 Institut Agro Rennes Angers 2022-01-01

65 rue de Saint Brieuc CS 84215 35042 Rennes CEDEX

260373249 https://ror.org/01dkyve95 Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement Institut Agro 2020-01-01

https://www.institut-agro.fr 0000000121539871 https://ror.org/05kpkpg04 Centre de Coopération Internationale en Recherche Agronomique pour le Développement Cirad 1984-06-01

Siège 42, rue Scheffer 75116 Paris

http://www.cirad.fr 050165224 https://ror.org/05q3vnk25 Institut de Recherche pour le Développement IRD

SiègeLe Sextant 44, bd de DunkerqueCS 9000913572 Marseille cedex 02

http://www.ird.fr/ 261038990 https://ror.org/03rnk6m14 Institut Agro Montpellier 2022-01-01

2, place Viala - Montpellier

https://www.institut-agro-montpellier.fr/ https://ror.org/051escj72 Université de Montpellier UM 2022-01-01

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