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Journal Articles International Journal of Molecular Sciences Year : 2022

An Atlas of Thyroid Hormone Receptors’ Target Genes in Mouse Tissues

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Abstract

We gathered available RNA-seq and ChIP-seq data in a single database to better characterize the target genes of thyroid hormone receptors in several cell types. This database can serve as a resource to analyze the mode of action of thyroid hormone (T3). Additionally, it is an easy-to-use and convenient tool to obtain information on specific genes regarding T3 regulation or to extract large gene lists of interest according to the users' criteria. Overall, this atlas is a unique compilation of recent sequencing data focusing on T3, its receptors, modes of action, targets and roles, which may benefit researchers within the field. A preliminary analysis indicates extensive variations in the repertoire of target genes where transcription is upregulated by chromatin-bound nuclear receptors. Although it has a major influence, chromatin accessibility is not the only parameter that determines the cellular selectivity of the hormonal response.
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hal-03885312 , version 1 (05-12-2022)

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Attribution - CC BY 4.0

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Yanis Zekri, Romain Guyot, Frederic Flamant. An Atlas of Thyroid Hormone Receptors’ Target Genes in Mouse Tissues. International Journal of Molecular Sciences, 2022, 23 (19), pp.11444. ⟨10.3390/ijms231911444⟩. ⟨hal-03885312⟩
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