First whole genome assembly and annotation of a European common bean cultivar using PacBio HiFi and Iso-Seq data
Résumé
Common bean (Phaseolus vulgaris L.) is the most impor-
tant grain legume for direct human consumption world-
wide. Flageolet bean originates from France and presents typ-
ical organoleptic properties, including the remarkable fea-
ture of having small pale green colored seeds. Here, we re-
port the whole-genome data, assembly and annotation of
the flageolet bean accession ‘Flavert’. High molecular weight
DNA and RNA were extracted and subjected to long-read se-
quencing using PacBio Sequel II platform. The genome con-
sisted of 566,238,753 bp assembled in 13 molecules, includ-
ing 11 chromosomes plus the mitochondrial and chloroplastic
genomes. Annotation predicted 29,549 protein coding genes
and 6,958 non-coding RNA. This high-quality genome (99.2%
BUSCO completeness) represents a valuable data set for fur-
ther genomic and genetic studies on common bean and more
generally on legumes. To our knowledge, this is the first
whole-genome sequence of a common bean accession orig-
inating from Europe.
Domaines
Biologie végétaleOrigine | Fichiers éditeurs autorisés sur une archive ouverte |
---|---|
Licence |