Worldwide diversity of endophytic fungi and insects associated with dormant tree twigs - INRAE - Institut national de recherche pour l’agriculture, l’alimentation et l’environnement
Article Dans Une Revue (Data Paper) Scientific Data Année : 2022

Worldwide diversity of endophytic fungi and insects associated with dormant tree twigs

Iva Franić (1, 2, 3) , Simone Prospero (4, 2) , Kalev Adamson (5) , Eric Allan (3) , Fabio Attorre (6) , Marie-Anne Auger-Rozenberg (7) , Sylvie Augustin (7) , Dimitrios Avtzis (8) , Wim Baert (9) , Marek Barta (10) , Kenneth Bauters (9) , Amani Bellahirech (11) , Piotr Boroń (12) , Helena Bragança (13, 14) , Tereza Brestovanská (15) , May Bente Brurberg (16, 17) , Treena Burgess (18) , Daiva Burokienė (19) , Michelle Cleary (20) , Juan Corley (21, 22) , David Coyle (23) , György Csóka (24) , Karel Černý (15) , Kateryna Davydenko (25) , Maarten de Groot (26) , Julio Javier Diez (27, 28) , H. Tuğba Doğmuş Lehtijärvi (29) , Rein Drenkhan (5) , Jacqueline Edwards (30, 31) , Mohammed Elsafy (20) , Csaba Béla Eötvös (24) , Roman Falko (32) , Jianting Fan (33) , Nina Feddern (2) , Ágnes Fürjes-Mikó (24) , Martin Gossner (2) , Bartłomiej Grad (12) , Martin Hartmann (34) , Ludmila Havrdova (15) , Miriam Kádasi Horáková (10) , Markéta Hrabětová (15) , Mathias Just Justesen (35) , Magdalena Kacprzyk (12) , Marc Kenis (1) , Natalia Kirichenko (36, 37) , Marta Kovač (38) , Volodymyr Kramarets (39) , Nikola Lacković (40) , Maria Victoria Lantschner (41) , Jelena Lazarević (42) , Marianna Leskiv (39) , Hongmei Li (43) , Corrie Lynne Madsen (35) , Chris Malumphy (44) , Dinka Matošević (38) , Iryna Matsiakh (39) , Tom May (45) , Johan Meffert (46) , Duccio Migliorini (47) , Christo Nikolov (48) , Richard O’hanlon (49, 50) , Funda Oskay (51) , Trudy Paap (52) , Taras Parpan (32) , Barbara Piškur (26) , Hans Peter Ravn (35) , John Richard (53) , Anne Ronse (9) , Alain Roques (7) , Beat Ruffner (4) , Karolis Sivickis (19) , Carolina Soliani (41) , Venche Talgø (16) , Maria Tomoshevich (54) , Anne Uimari (55) , Michael Ulyshen (56) , Anna Maria Vettraino (57) , Caterina Villari (58) , Yongjun Wang (33) , Johanna Witzell (59) , Milica Zlatković (60) , René Eschen (1)
1 CABI, Delemont, Switzerland
2 Swiss Federal Institute for Forest, Snow and Landscape Research WSL
3 UNIBE - Universität Bern = University of Bern = Université de Berne
4 WSL - Institut Fédéral de Recherches sur la Forêt, la Neige et le Paysage
5 EMU - Estonian University of Life Sciences
6 UNIROMA - Università degli Studi di Roma "La Sapienza" = Sapienza University [Rome]
7 URZF - Zoologie forestière
8 HAO Demeter - Hellenic Agricultural Organization Demeter
9 Plantentuin - Meise Botanic Garden [Belgium]
10 SAS - Slovak Academy of Sciences
11 INRGREF - Institut National de Recherche en Génie Rural Eaux et Forêts
12 University of Agriculture in Krakow
13 INIAV - Instituto Nacional de Investigação Agrária e Veterinária = National Institute for Agrarian and Veterinary Research [Oeiras, Portugal]
14 ITQB - Instituto de Tecnologia Química e Biológica António Xavier
15 The Silva Tarouca Research Institute for Landscape and Ornamental Gardening
16 NIBIO - Norsk institutt for bioøkonomi=Norwegian Institute of Bioeconomy Research
17 NMBU - Norwegian University of Life Sciences
18 Murdoch University [Perth]
19 Nature Research Centre [Vilnius]
20 SLU - Swedish University of Agricultural Sciences = Sveriges lantbruksuniversitet
21 INTA - Instituto Nacional de Tecnología Agropecuaria
22 CONICET - Consejo Nacional de Investigaciones Científicas y Técnicas [Buenos Aires]
23 Clemson University
24 University of West Hungary [Sopron]
25 URIFFM - Ukrainian Research Institute of Forestry and Forest Melioration
26 Slovenian Forestry Institute
27 UVa - Universidad de Valladolid [Valladolid]
28 INIA - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria = National Institute for Agricultural and Food Research and Technology
29 Isparta University of Applied Sciences
30 La Trobe University [Melbourne]
31 AgriBio - Agriculture Victoria
32 UkrRIMF - Ukrainian Research Institute of Mountain Forestry
33 Zhejiang University [Hangzhou, China]
34 Institute of Agricultural Sciences [Zürich]
35 UCPH - University of Copenhagen = Københavns Universitet
36 V.N. Sukachev Institute of Forest
37 SibFU - Siberian Federal University
38 Croatian Forest Research Institute
39 UNFU - Ukrainian National Forestry University
40 Auteur indépendant
41 IFAB - Instituto de Investigaciones Forestales y Agropecuarias Bariloche
42 UCG - University of Montenegro
43 CABI - Centre for Agricultural and Biosciences International
44 Fera Science Ltd
45 Royal Botanic Gardens [Kew]
46 Ministry of Agriculture, Nature and Food Quality
47 IPSP - CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia]
48 National Forest Centre - Národné lesnícke centrum [Zvolen]
49 Department of Agriculture Food and the Marine [Dublin]
50 Agri Food and Biosciences Institute
51 Çankırı Karatekin University
52 University of Pretoria [South Africa]
53 TAFORI - Tanzania Forestry Research Institute
54 SB RAS - Siberian Branch of the Russian Academy of Sciences
55 LUKE - Natural Resources Institute Finland
56 USDA Forest Service
57 Università degli studi della Tuscia [Viterbo]
58 Agricultural University of Georgia
59 Linnaeus University
60 University of Novi Sad
Iva Franić
CABI, Delemont, Switzerland
Swiss Federal Institute for Forest, Snow and Landscape Research WSL
Universität Bern = University of Bern = Université de Berne
Simone Prospero
Institut Fédéral de Recherches sur la Forêt, la Neige et le Paysage
Swiss Federal Institute for Forest, Snow and Landscape Research WSL
Kalev Adamson
Estonian University of Life Sciences
Eric Allan
Universität Bern = University of Bern = Université de Berne
Fabio Attorre
Università degli Studi di Roma "La Sapienza" = Sapienza University [Rome]
Marie-Anne Auger-Rozenberg
Zoologie forestière
CV
Sylvie Augustin
Zoologie forestière
CV
Dimitrios Avtzis
Hellenic Agricultural Organization Demeter
Wim Baert
  • Fonction : Auteur
Meise Botanic Garden [Belgium]
Marek Barta
Slovak Academy of Sciences
Kenneth Bauters
  • Fonction : Auteur
Meise Botanic Garden [Belgium]
Amani Bellahirech
Institut National de Recherche en Génie Rural Eaux et Forêts
Piotr Boroń
  • Fonction : Auteur
University of Agriculture in Krakow
Helena Bragança
Instituto Nacional de Investigação Agrária e Veterinária = National Institute for Agrarian and Veterinary Research [Oeiras, Portugal]
Instituto de Tecnologia Química e Biológica António Xavier
Tereza Brestovanská
  • Fonction : Auteur
The Silva Tarouca Research Institute for Landscape and Ornamental Gardening
May Bente Brurberg
Norsk institutt for bioøkonomi=Norwegian Institute of Bioeconomy Research
Norwegian University of Life Sciences
Treena Burgess
Murdoch University [Perth]
Daiva Burokienė
Nature Research Centre [Vilnius]
Michelle Cleary
Swedish University of Agricultural Sciences = Sveriges lantbruksuniversitet
Juan Corley
Instituto Nacional de Tecnología Agropecuaria
Consejo Nacional de Investigaciones Científicas y Técnicas [Buenos Aires]
David Coyle
  • Fonction : Auteur
Clemson University
György Csóka
  • Fonction : Auteur
University of West Hungary [Sopron]
Karel Černý
  • Fonction : Auteur
The Silva Tarouca Research Institute for Landscape and Ornamental Gardening
Kateryna Davydenko
  • Fonction : Auteur
Ukrainian Research Institute of Forestry and Forest Melioration
Maarten de Groot
Slovenian Forestry Institute
Julio Javier Diez
  • Fonction : Auteur
Universidad de Valladolid [Valladolid]
Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria = National Institute for Agricultural and Food Research and Technology
H. Tuğba Doğmuş Lehtijärvi
  • Fonction : Auteur
Isparta University of Applied Sciences
Rein Drenkhan
  • Fonction : Auteur
Estonian University of Life Sciences
Jacqueline Edwards
La Trobe University [Melbourne]
Agriculture Victoria
Mohammed Elsafy
Swedish University of Agricultural Sciences = Sveriges lantbruksuniversitet
Csaba Béla Eötvös
  • Fonction : Auteur
University of West Hungary [Sopron]
Roman Falko
Ukrainian Research Institute of Mountain Forestry
Jianting Fan
  • Fonction : Auteur
Zhejiang University [Hangzhou, China]
Nina Feddern
Swiss Federal Institute for Forest, Snow and Landscape Research WSL
Ágnes Fürjes-Mikó
  • Fonction : Auteur
University of West Hungary [Sopron]
Martin Gossner
Swiss Federal Institute for Forest, Snow and Landscape Research WSL
Bartłomiej Grad
  • Fonction : Auteur
University of Agriculture in Krakow
Martin Hartmann
Institute of Agricultural Sciences [Zürich]
Ludmila Havrdova
  • Fonction : Auteur
The Silva Tarouca Research Institute for Landscape and Ornamental Gardening
Miriam Kádasi Horáková
Slovak Academy of Sciences
Markéta Hrabětová
The Silva Tarouca Research Institute for Landscape and Ornamental Gardening
Mathias Just Justesen
  • Fonction : Auteur
University of Copenhagen = Københavns Universitet
Magdalena Kacprzyk
University of Agriculture in Krakow
Marc Kenis
  • Fonction : Auteur
CABI, Delemont, Switzerland
Natalia Kirichenko
V.N. Sukachev Institute of Forest
Siberian Federal University
Marta Kovač
Croatian Forest Research Institute
Volodymyr Kramarets
  • Fonction : Auteur
Ukrainian National Forestry University
Nikola Lacković
Auteur indépendant
Maria Victoria Lantschner
  • Fonction : Auteur
Instituto de Investigaciones Forestales y Agropecuarias Bariloche
Jelena Lazarević
University of Montenegro
Marianna Leskiv
  • Fonction : Auteur
Ukrainian National Forestry University
Hongmei Li
  • Fonction : Auteur
Centre for Agricultural and Biosciences International
Corrie Lynne Madsen
University of Copenhagen = Københavns Universitet
Chris Malumphy
  • Fonction : Auteur
Fera Science Ltd
Dinka Matošević
Croatian Forest Research Institute
Iryna Matsiakh
  • Fonction : Auteur
Ukrainian National Forestry University
Tom May
Royal Botanic Gardens [Kew]
Johan Meffert
  • Fonction : Auteur
Ministry of Agriculture, Nature and Food Quality
Duccio Migliorini
  • Fonction : Auteur
CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia]
Christo Nikolov
National Forest Centre - Národné lesnícke centrum [Zvolen]
Richard O’hanlon
Department of Agriculture Food and the Marine [Dublin]
Agri Food and Biosciences Institute
Funda Oskay
Çankırı Karatekin University
Trudy Paap
University of Pretoria [South Africa]
Taras Parpan
Ukrainian Research Institute of Mountain Forestry
Barbara Piškur
Slovenian Forestry Institute
Hans Peter Ravn
University of Copenhagen = Københavns Universitet
John Richard
Tanzania Forestry Research Institute
Anne Ronse
  • Fonction : Auteur
Meise Botanic Garden [Belgium]
Alain Roques
Zoologie forestière
CV
Beat Ruffner
  • Fonction : Auteur
Institut Fédéral de Recherches sur la Forêt, la Neige et le Paysage
Karolis Sivickis
  • Fonction : Auteur
Nature Research Centre [Vilnius]
Carolina Soliani
Instituto de Investigaciones Forestales y Agropecuarias Bariloche
Venche Talgø
  • Fonction : Auteur
Norsk institutt for bioøkonomi=Norwegian Institute of Bioeconomy Research
Maria Tomoshevich
Siberian Branch of the Russian Academy of Sciences
Anne Uimari
  • Fonction : Auteur
Natural Resources Institute Finland
Michael Ulyshen
  • Fonction : Auteur
USDA Forest Service
Anna Maria Vettraino
Università degli studi della Tuscia [Viterbo]
Caterina Villari
Agricultural University of Georgia
Yongjun Wang
Zhejiang University [Hangzhou, China]
Johanna Witzell
Linnaeus University
Milica Zlatković
University of Novi Sad
René Eschen
CABI, Delemont, Switzerland

Résumé

Abstract International trade in plants and climate change are two of the main factors causing damaging tree pests (i.e. fungi and insects) to spread into new areas. To mitigate these risks, a large-scale assessment of tree-associated fungi and insects is needed. We present records of endophytic fungi and insects in twigs of 17 angiosperm and gymnosperm genera, from 51 locations in 32 countries worldwide. Endophytic fungi were characterized by high-throughput sequencing of 352 samples from 145 tree species in 28 countries. Insects were reared from 227 samples of 109 tree species in 18 countries and sorted into taxonomic orders and feeding guilds. Herbivorous insects were grouped into morphospecies and were identified using molecular and morphological approaches. This dataset reveals the diversity of tree-associated taxa, as it contains 12,721 fungal Amplicon Sequence Variants and 208 herbivorous insect morphospecies, sampled across broad geographic and climatic gradients and for many tree species. This dataset will facilitate applied and fundamental studies on the distribution of fungal endophytes and insects in trees.

Domaines

Milieux et Changements globaux

Marie-Anne Auger-Rozenberg  : Connectez-vous pour contacter le contributeur

https://hal.inrae.fr/hal-04175404

Soumis le : mercredi 2 août 2023-10:10:26

Dernière modification le : dimanche 29 décembre 2024-18:44:02

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Dates et versions

hal-04175404 , version 1 (02-08-2023)

Identifiants

Citer

Iva Franić, Simone Prospero, Kalev Adamson, Eric Allan, Fabio Attorre, et al.. Worldwide diversity of endophytic fungi and insects associated with dormant tree twigs. Scientific Data , 2022, 9 (1), pp.62. ⟨10.1038/s41597-022-01162-3⟩. ⟨hal-04175404⟩

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