D6.5 Development and assessment of a validation method for assessment of plant trait extraction from the ROMI pipeline - INRAE - Institut national de recherche pour l’agriculture, l’alimentation et l’environnement
Reports Year : 2022

D6.5 Development and assessment of a validation method for assessment of plant trait extraction from the ROMI pipeline

Abstract

Deliverable D6.5 is a demonstrator of the development and assessment of a validation method for assessment of plant trait extraction from the ROMI pipeline. The demonstrator is provided as a full standalone docker image that contains pedagogical jupyter notebooks to run and discover our programs. The demonstrator notebooks are meant to present in a pedagogic manner the tools we developed to assess how good a phyllotaxis measure is and how good this assessment is. In brief, it allows anybody to simulate phyllotaxis data (pair of sequences consisting of ground truth sequences and their error-prone measures), assess the measure performance with our new program ‘sm-dtw’ (detect errors and quantify precision) and control that this program correctly interpret the differences between the measure and its ground truth reference.
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Dates and versions

hal-04723119 , version 1 (07-10-2024)

Identifiers

  • HAL Id : hal-04723119 , version 1

Cite

Fabrice Besnard, Christophe Godin. D6.5 Development and assessment of a validation method for assessment of plant trait extraction from the ROMI pipeline. Commission européenne. 2022. ⟨hal-04723119⟩
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