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De novo genome and transcriptome resources of the Adzuki bean borer Ostrinia scapulalis (Lepidoptera: Crambidae)

Bernhard Gschloessl 1, 2, * Franck Dorkeld 1, 2 Philippe Audiot 1, 2 Anthony Bretaudeau 3, 4 Carole Kerdelhue 1, 2 Rejane Streiff 1, 2
* Corresponding author
4 Plateforme bioinformatique GenOuest [Rennes]
UR1 - Université de Rennes 1, Plateforme Génomique Santé Biogenouest®, Inria Rennes – Bretagne Atlantique , IRISA-D7 - GESTION DES DONNÉES ET DE LA CONNAISSANCE
Abstract : We present a draft genome assembly with a prediction and automated functional annotation of coding genes, and a reference transcriptome of the Adzuki bean borer, , based on RNA sequencing of various tissues and developmental stages. The genome assembly spans 419 Mb, has a GC content of 37.4% and includes 26,120 predicted coding genes. The reference transcriptome holds 33,080 unigenes and contains a high proportion of a set of genes conserved in eukaryotes and arthropods, used as quality assessment of the reconstructed transcripts. The new genomic and transcriptomic data presented here significantly enrich the public sequence databases for the Crambidae and Lepidoptera, and represent useful resources for future researches related to the evolution and the adaptation of phytophagous moths. The genome and transcriptome assemblies have been deposited and made accessible a NCBI BioProject (id PRJNA390510) and the LepidoDB database (http://bipaa.genouest.org/sp/ostrinia_scapulalis/).
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Bernhard Gschloessl, Franck Dorkeld, Philippe Audiot, Anthony Bretaudeau, Carole Kerdelhue, et al.. De novo genome and transcriptome resources of the Adzuki bean borer Ostrinia scapulalis (Lepidoptera: Crambidae). Data in Brief, Elsevier, 2018, 17, pp.781-787. ⟨10.1016/j.dib.2018.01.073⟩. ⟨hal-02627842⟩

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