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Article dans une revue

Development of nuclear and plastid SNP and INDEL markers for population genetic studies and timber traceability of Carapa species

Abstract : Low coverage MiSeq genome sequencing and restriction associated DNA sequencing (RADseq) were used to identify nuclear and plastid SNP and INDEL genetic markers in Carapa guianensis. 261 genetic markers including 237 nuclear SNPs, 22 plastid SNPs, and 2 plastid INDELs are described based on 96 genotyped individuals from French Guiana, Brazil, Peru, and Bolivia. The best 117 SNPs for identifying population structure and performing individual assignment are assembled into four multiplexes for MassARRAY genotyping.
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https://hal.inrae.fr/hal-02619672
Déposant : Migration Prodinra <>
Soumis le : lundi 25 mai 2020 - 20:20:58
Dernière modification le : jeudi 25 février 2021 - 14:26:02

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Niklas Tysklind, Celine Blanc-Jolivet, Malte Mader, Barbara R. V. Meyer-Sand, Kathelyn Paredes-Villanueva, et al.. Development of nuclear and plastid SNP and INDEL markers for population genetic studies and timber traceability of Carapa species. Conservation Genetics Resources, Springer, 2019, 11 (3), pp.337-339. ⟨10.1007/s12686-019-01090-2⟩. ⟨hal-02619672⟩

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