The assessment of net rainfall, defined as the intermediate hydrological variable linked in between the hillslope and the river network, is a challenge. This paper presents a method for net rainfall estimation, using inverse modelling associated to a geomorphology-based transfer function. The analysis is carried out in semi-arid Tunisia, with a dataset from event discharges in a mesoscale dryland basin. A complete sensitivity analysis is developed, along with a discussion of validity limits for simplifying assumptions and the identification of paths for improvement. This work could be relevant for data-scarce areas, thanks to the use of simple dynamic conceptualization and being based on observable geomorphological features, adjusted to the available data and knowledge.