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The Ectocarpus Genome and Brown Algal Genomics The Ectocarpus Genome Consortium

J. Mark Cock 1, 2 Lieven Sterck 3, 4 Sophia Ahmed 1, 2 Andrew E. Allen 5 Grigoris Amoutzias 3, 4 Véronique Anthouard 6 Francois Artiguenave 6 Alok Arun 1, 2 Jean-Marc Aury 6 Jonathan H. Badger 5 Bank Beszteri 7 Kenny Billiau 3, 4 Eric Bonnet 3, 4 John H. Bothwell 8, 9 Chris Bowler 10, 11 Catherine Boyen 1, 2 Colin Brownlee Carl J. Carrano Benedicte Charrier Ga Youn Cho Susana M. Coelho Jonas Collen Gildas Le Corguillé Erwan Corre Laurence Dartevelle Corinne da Silva Ludovic Delage Nicolas Delaroque Simon Dittami Sylvie Doulbeau Marek Elias Garry Farnham Claire M. M. Gachon Olivier Godfroy Bernhard Gschloessl Svenja Heesch Kamel Jabbari Claire Jubin Hiroshi Kawai Kei Kimura Bernard Kloareg Frithjof C. Kuepper Daniel Lang Aude Le Bail Rémy Luthringer Catherine Leblanc Patrice Lerouge Martin Lohr Pascal J. Lopez Nicolas Macaisne Cindy Martens Florian Maumus Gurvan Michel Diego Miranda-Saavedra Julia Morales Herve Moreau Taizo Motomura Chikako Nagasato Carolyn A. Napoli David R. Nelson Pi Nyvall-Collén Akira F. Peters Cyril Pommier Philippe Potin Julie Poulain Hadi Quesneville Betsy Read Stefan A. Rensing Andrés Ritter Sylvie Rousvoal Manoj Samanta Gaelle Samson Declan C. Schroeder Delphine Scornet Béatrice Ségurens Martina Strittmatter Thierry Tonon James W. Tregear Klaus Valentin Peter von Dassow Takahiro Yamagishi Pierre Rouzé Yves van de Peer Patrick Wincker
Abstract : Brown algae are important organisms both because of their key ecological roles in coastal ecosystems and because of the remarkable biological features that they have acquired during their unusual evolutionary history. The recent sequencing of the complete genome of the filamentous brown alga Ectocarpus has provided unprecedented access to the molecular processes that underlie brown algal biology. Analysis of the genome sequence, which exhibits several unusual structural features, identified genes that are predicted to play key roles in several aspects of brown algal metabolism, in the construction of the multicellular bodyplan and in resistance to biotic and abiotic stresses. Information from the genome sequence is currently being used in combination with other genomic, genetic and biochemical tools to further investigate these and other aspects of brown algal biology at the molecular level. Here, we review some of the major discoveries that emerged from the analysis of the Ectocarpus genome sequence, with a particular focus on the unusual genome structure, inferences about brown algal evolution and novel aspects of brown algal metabolism.
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Submitted on : Friday, May 29, 2020 - 11:43:42 AM
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J. Mark Cock, Lieven Sterck, Sophia Ahmed, Andrew E. Allen, Grigoris Amoutzias, et al.. The Ectocarpus Genome and Brown Algal Genomics The Ectocarpus Genome Consortium. Advances in Botanical Research, Elsevier, 2012, 64, pp.141 - 184. ⟨10.1016/B978-0-12-391499-6.00005-0⟩. ⟨hal-02649287⟩

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