A novel foveavirus identified in wild grapevine (Vitis vinifera subsp. sylvestris) - INRAE - Institut national de recherche pour l’agriculture, l’alimentation et l’environnement
Article Dans Une Revue Archives of Virology Année : 2020

A novel foveavirus identified in wild grapevine (Vitis vinifera subsp. sylvestris)

Jean-Sébastien Reynard
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Justine Brodard
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Eric Remoliff
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Marie Lefebvre
Olivier Schumpp
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Thierry T. Candresse

Résumé

We report the genome sequence of a putative new foveavirus infecting non-cultivated Vitis vinifera, tentatively named "grapevine foveavirus A" (GFVA). This virus was identified by high-throughput sequencing analysis of a European wild Vitis collected in Switzerland. Phylogenetic analysis revealed that this virus clustered with known grapevine virus T (GVT) isolates but was clearly distinct from any of them. If considering the International Committee of Taxonomy of Viruses (ICTV)-suggested foveavirus species demarcation criterion based on sequence similarity in the replicase gene/protein, this virus should be considered a member of a new species closely related to GVT. On the other hand, comparison of capsid gene/ protein sequences using the same criteria indicates that GFVA is at the border of species demarcation. Whether this virus represents a highly divergent GVT isolate or a member of a distinct but closely related species is discussed.
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hal-02983032 , version 1 (29-10-2020)

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Jean-Sébastien Reynard, Justine Brodard, Eric Remoliff, Marie Lefebvre, Olivier Schumpp, et al.. A novel foveavirus identified in wild grapevine (Vitis vinifera subsp. sylvestris). Archives of Virology, 2020, 165 (12), pp.2999 - 3002. ⟨10.1007/s00705-020-04817-x⟩. ⟨hal-02983032⟩
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