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Article dans une revue

Nuclear and chloroplastic SNP markers for genetic studies of timber origin for Hymenaea trees

Abstract : We developed nuclear and chloroplastic single nucleotide polymorphism (SNP) and INDEL (insertion/deletion) markers using restriction associated DNA sequencing (RADSeq) and low coverage MiSeq genome sequencing to set up a genetic tracking method of the geographical origin of Hymenaea sp. From two initial sets of 358 and 32 loci used to genotype at least 94 individuals, a final set of 75 nSNPs, 50 cpSNPs and 6 INDELs identifying significant population structure was developed.
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https://hal.inrae.fr/hal-02628115
Déposant : Migration Prodinra <>
Soumis le : mardi 26 mai 2020 - 22:14:40
Dernière modification le : jeudi 25 février 2021 - 14:26:03

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Camila L. Chaves, Celine Blanc-Jolivet, Alexandre M. Sebbenn, Malte Mader, Barbara R. V. Meyer-Sand, et al.. Nuclear and chloroplastic SNP markers for genetic studies of timber origin for Hymenaea trees. Conservation Genetics Resources, Springer, 2019, 11 (3), pp.329-331. ⟨10.1007/s12686-018-1077-1⟩. ⟨hal-02628115⟩

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