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Article Dans Une Revue Journal of Animal Science Année : 2016

Application of single-step genomic evaluation for crossbred performance in pig

Résumé

Crossbreding is predominant and intensively used in commercial meat production systems, especially in poultry and swine. Genomic evaluation has been successfully applied for breeding within purebreds but also offers opportunities of selecting purebreds for crossbred performance by combining information from purebreds with information from crossbreds. However, it generally requires that all relevant animals are genotyped, which is costly and presently does not seem to be feasible in practice. Recently, a novel single-step BLUP method for genomic evaluation of both purebred and crossbred performance has been developed that can incorporate marker genotypes into a traditional animal model. This new method has not been validated in real data sets. In this study, we applied this single-step method to analyze data for the maternal trait of total number of piglets born in Danish Landrace, Yorkshire, and two-way crossbred pigs in different scenarios. The genetic correlation between purebred and crossbred performances was investigated first, and then the impact of (crossbred) genomic information on prediction reliability for crossbred performance was explored. The results confirm the existence of a moderate genetic correlation, and it was seen that the standard errors on the estimates were reduced when including genomic information. Models with marker information, especially crossbred genomic information, improved model-based reliabilities for crossbred performance of purebred boars and also improved the predictive ability for crossbred animals and, to some extent, reduced the bias of prediction. We conclude that the new single-step BLUP method is a good tool in the genetic evaluation for crossbred performance in purebred animals.
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Dates et versions

hal-02640145 , version 1 (28-05-2020)

Identifiants

Citer

Tao Xiang, B. Nielsen, G. Su, Andres Legarra, O. F. Christensen. Application of single-step genomic evaluation for crossbred performance in pig. Journal of Animal Science, 2016, 94 (3), pp.936-948. ⟨10.2527/jas.2015-9930⟩. ⟨hal-02640145⟩
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