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Article Dans Une Revue Bioinformatics Année : 2009

NOBLAST and JAMBLAST: New Options for BLAST and a Java Application Manager for BLAST results

Résumé

NOBLAST (New Options for BLAST) is an open source program that provides a new user-friendly tabular output format for various NCBI BLAST programs (Blastn, Blastp, Blastx, Tblastn, Tblastx, Mega BLAST and Psi BLAST) without any use of a parser and provides E-value correction in case of use of segmented BLAST database. JAMBLAST using the NOBLAST output allows the user to manage, view and filter the BLAST hits using a number of selection criteria.

Domaines

Biotechnologies

Dates et versions

hal-02659946 , version 1 (30-05-2020)

Identifiants

Citer

Jacques Lagnel, Costas S. Tsigenopoulos, Ioannis Iliopoulos. NOBLAST and JAMBLAST: New Options for BLAST and a Java Application Manager for BLAST results. Bioinformatics, 2009, 25 (6), pp.824-826. ⟨10.1093/bioinformatics/btp067⟩. ⟨hal-02659946⟩

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