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Biogeographical patterns of soil bacterial communities

Samuel Dequiedt 1, 2 Jean Thioulouse 3, 4 Claudy Jolivet 5 Nicolas Saby 5 Mélanie Lelièvre 1, 2 Pierre-Alain Maron 1, 2 Manuel Martin 5, 6 Nicolas Chemidlin Prévost-Bouré 1 Benoit Toutain 5 Dominique Arrouays 5 Philippe Lemanceau 1 Lionel Ranjard 1
1 MSE - Microbiologie du Sol et de l'Environnement
2 FLAVIC - FLAveur, VIsion et Comportement du consommateur
3 LBBE - Laboratoire de Biométrie et Biologie Evolutive - UMR 5558
4 Ecologie quantitative et évolutive des communautés
Département écologie évolutive [LBBE]
5 InfoSol - InfoSol
6 Evolution, adaptation et comportement
Département écologie évolutive [LBBE]
Abstract : This study provides the first maps of variations in bacterial community structure on a broad scale based on genotyping of DNA extracts from 593 soils from four different regions of France (North, Brittany, South-East and Landes). Soils were obtained from the soil library of RMQS (Réseau de Mesures de la Qualité des Sols = French soil quality monitoring network). The relevance of a biogeographic approach for studying bacterial communities was demonstrated by the great variability in community structure and specific geographical patterns within and between the four regions. The data indicated that the distribution of bacterial community composition might be more related to local factors such as soil type and land cover than to more global factors such as climatic and geomorphologic characteristics. Furthermore, the regional pools of biodiversity could be ordered: South-East >=North > Brittany > Landes, according to the observed regional variability of the bacterial communities, which could be helpful for improving land use in accordance with soil biodiversity management.
Keywords : BACTERIAL COMMUNITIES GENOTYPING OF DNA EXTRACTS GEOGRAPHICAL PATTERNS
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Journal articles
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https://hal.inrae.fr/hal-02668713
Contributor : Migration Prodinra <>
Submitted on : Sunday, May 31, 2020 - 1:27:14 PM
Last modification on : Thursday, August 26, 2021 - 3:11:40 AM

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Samuel Dequiedt, Jean Thioulouse, Claudy Jolivet, Nicolas Saby, Mélanie Lelièvre, et al.. Biogeographical patterns of soil bacterial communities. Environmental Microbiology Reports, Wiley, 2009, 1 (4), pp.251 - 255. ⟨10.1111/j.1758-2229.2009.00040.x⟩. ⟨hal-02668713⟩

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