CAR(H)(T)AGene: multipopulation integrated genetic and radiation hybrid mapping - INRAE - Institut national de recherche pour l’agriculture, l’alimentation et l’environnement Access content directly
Journal Articles Bioinformatics Year : 2005

CAR(H)(T)AGene: multipopulation integrated genetic and radiation hybrid mapping

Abstract

CarthaGene: is an integrated genetic and radiation hybrid (RH) mapping tool which can deal with multiple populations, including mixtures of genetic and RH data. CarthaGene: performs multipoint maximum likelihood estimations with accelerated expectation– maximization algorithms for some pedigrees and has sophisticated algorithms for marker ordering. Dedicated heuristics for framework mapping are also included. Carth aGene: can be used as a C++ library, through a shell command and a graphical interface. The XML output for companion tools is integrated.

Dates and versions

hal-02682633 , version 1 (01-06-2020)

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Cite

Simon de Givry, Martin Bouchez, Patrick P. Chabrier, Denis Milan, Thomas Schiex. CAR(H)(T)AGene: multipopulation integrated genetic and radiation hybrid mapping. Bioinformatics, 2005, 21 (5), pp.1703-1704. ⟨10.1093/bioinformatics/bti222⟩. ⟨hal-02682633⟩
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