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Logiciel Année : 2017

mixKernel: Omics Data Integration Using Kernel Methods

Résumé

Kernel-based methods are powerful methods for integrating heterogeneous types of data. mixKernel aims at providing methods to combine kernel for unsupervised exploratory analysis. Different solutions are provided to compute a meta-kernel, in a consensus way or in a way that best preserves the original topology of the data. mixKernel also integrates kernel PCA to visualize similarities between samples in a non linear space and from the multiple source point of view. Functions to assess and display important variables are also provided in the package. Jerome Mariette and Nathalie Villa-Vialaneix (2017) .
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Dates et versions

hal-02791779 , version 1 (05-06-2020)

Identifiants

  • HAL Id : hal-02791779 , version 1
  • PRODINRA : 466850

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Jérôme J. Mariette, Nathalie Vialaneix. mixKernel: Omics Data Integration Using Kernel Methods. 2017. ⟨hal-02791779⟩
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