Validation of growth-related QTL for marker assisted selection in turbot (Scophthalmus maximus) - INRAE - Institut national de recherche pour l’agriculture, l’alimentation et l’environnement Accéder directement au contenu
Poster De Conférence Année : 2015

Validation of growth-related QTL for marker assisted selection in turbot (Scophthalmus maximus)

Résumé

Classical familiar breeding programs have improved growth rate in turbot. However, marker assisted selection may further increase growth rate, because it is possible to identify specific genomic regions explaining a significant proportion of the phenotypic variance of such trait. Moreover, marker assisted selection could provide a more efficient selection of genetic variants that, otherwise, could be lost in classical breeding programs. The implementation of marker assisted selection requires markers tightly linked to the causal mutation(s). The increase of turbot genomic resources during the last years has enabled the construction of linkage maps of appropriate density to detect growth-related QTL. The objective of this study was to validate previously detected molecular markers associated to growth related traits in turbot. Eighteen full-sib families derived from breeding programs were genotyped for 39 markers at 11 linkage groups to look for association to weight, length and Fulton’s condition factor. The results indicate that 25 markers out of the 39 analysed showed significant association in at least one family and for at least one trait. In addition, all the considered linkage groups comprised at least one marker with significant association. Twenty markers out of the 39 analysed jointly explained 47.5% of the phenotypic variance of weight; 18 markers explained up to 57.7% of the phenotypic variance for length; and only one marker was associated with Fulton’s condition factor, explaining 1.2% of the phenotypic variance. The explained phenotypic variance when considering allelic variants, instead of markers, was higher (87.3% for weight, 89.1% for length, and 11.4% for Fulton’s condition factor). The conclusion is that a set of markers and alleles highly associated with growth in turbot is now available. In practical terms and due to the sparse distribution of growth-related QTL in turbot across the genome, several markers from different linkage groups should be used to increase genetic gain in selection programs.

Domaines

Autre [q-bio.OT]
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Dates et versions

hal-02797746 , version 1 (05-06-2020)

Identifiants

  • HAL Id : hal-02797746 , version 1
  • PRODINRA : 476194

Citer

A Sciara, Silvia Teresa Rodríguez-Ramilo, M. Hermida, A. Gómez-Tato, J. Fernandez, et al.. Validation of growth-related QTL for marker assisted selection in turbot (Scophthalmus maximus). ISGA XII. International Symposium on Genetics in Aquaculture XII, Jun 2015, Santiago de Compostela, Spain. 2015. ⟨hal-02797746⟩

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