A Multiomic Approach to Understand How Pleurotus eryngii Transforms Non-Woody Lignocellulosic Material - INRAE - Institut national de recherche pour l’agriculture, l’alimentation et l’environnement
Article Dans Une Revue Journal of Fungi Année : 2021

A Multiomic Approach to Understand How Pleurotus eryngii Transforms Non-Woody Lignocellulosic Material

Rashid Babiker
  • Fonction : Auteur
Delphine Chaduli
  • Fonction : Auteur
  • PersonId : 1206214
Anna Lipzen
  • Fonction : Auteur
  • PersonId : 1124791
Mei Wang
  • Fonction : Auteur
  • PersonId : 1140753
Mansi Chovatia
Jorge Rencoret
  • Fonction : Auteur
  • PersonId : 1140755
Gisela Marques
  • Fonction : Auteur
  • PersonId : 1140756
María Isabel Sánchez-Ruiz
  • Fonction : Auteur
Teeratas Kijpornyongpan
  • Fonction : Auteur
  • PersonId : 1124792
Davinia Salvachúa
Susana Camarero
Vivian Ng
Ana Gutiérrez
Igor V Grigoriev
Angel T Martínez
  • Fonction : Auteur
  • PersonId : 870471
Francisco J Ruiz-Dueñas

Résumé

Pleurotus eryngii is a grassland-inhabiting fungus of biotechnological interest due to its ability to colonize non-woody lignocellulosic material. Genomic, transcriptomic, exoproteomic, and metabolomic analyses were combined to explain the enzymatic aspects underlaying wheat–straw transformation. Up-regulated and constitutive glycoside–hydrolases, polysaccharide–lyases, and carbohydrate–esterases active on polysaccharides, laccases active on lignin, and a surprisingly high amount of constitutive/inducible aryl–alcohol oxidases (AAOs) constituted the suite of extracellular enzymes at early fungal growth. Higher enzyme diversity and abundance characterized the longer-term growth, with an array of oxidoreductases involved in depolymerization of both cellulose and lignin, which were often up-regulated since initial growth. These oxidative enzymes included lytic polysaccharide monooxygenases (LPMOs) acting on crystalline polysaccharides, cellobiose dehydrogenase involved in LPMO activation, and ligninolytic peroxidases (mainly manganese-oxidizing peroxidases), together with highly abundant H2O2-producing AAOs. Interestingly, some of the most relevant enzymes acting on polysaccharides were appended to a cellulose-binding module. This is potentially related to the non-woody habitat of P. eryngii (in contrast to the wood habitat of many basidiomycetes). Additionally, insights into the intracellular catabolism of aromatic compounds, which is a neglected area of study in lignin degradation by basidiomycetes, were also provided. The multiomic approach reveals that although non-woody decay does not result in dramatic modifications, as revealed by detailed 2D-NMR and other analyses, it implies activation of the complete set of hydrolytic and oxidative enzymes characterizing lignocellulose-decaying basidiomycetes.
Fichier principal
Vignette du fichier
2021_Pena_Journal-of-Fungi.pdf (6.27 Mo) Télécharger le fichier

Dates et versions

hal-03549041 , version 1 (31-01-2022)

Licence

Identifiants

Citer

Ander Peña, Rashid Babiker, Delphine Chaduli, Anna Lipzen, Mei Wang, et al.. A Multiomic Approach to Understand How Pleurotus eryngii Transforms Non-Woody Lignocellulosic Material. Journal of Fungi, 2021, 7 (6), ⟨10.3390/jof7060426⟩. ⟨hal-03549041⟩
38 Consultations
51 Téléchargements

Altmetric

Partager

More