Study of plasmid-based expression level heterogeneity under plasmid-curing like conditions in Cupriavidus necator - INRAE - Institut national de recherche pour l’agriculture, l’alimentation et l’environnement
Article Dans Une Revue Journal of Biotechnology Année : 2022

Study of plasmid-based expression level heterogeneity under plasmid-curing like conditions in Cupriavidus necator

Résumé

Plasmid expression level heterogeneity in Cupriavidus necator was studied in response to stringent culture conditions, supposed to enhance plasmid instability, through plasmid curing strategies. Two plasmid curing strategies were compared based on their efficiency at generating heterogeneity in batch: rifampicin addition and temperature increase. A temperature increase from 30 degrees to 37 degrees C was the most efficient plasmid curing strategy. To generate a heterogeneous population in terms of plasmid expression levels, successive batches at supra optimal culture temperature (i.e. 37 degrees C) were initially conducted. Three distinct fluorescent subpopulations P-0 (not fluorescent), P-1 (low fluorescence intensity, median = 1 10(3)) and P-2 (high fluorescence intensity, median = 6 10(3)) were obtained. From there, the chemostat culture was implemented to study the long-term stress response under well-controlled environment at defined dilution rates. For dilution rates comprised between 0.05 and 0.10 h(-1), the subpopulation P-2 (62% vs 90%) was favored compared to P1 cells (54% vs 1%), especially when growth rate increased. Our biosensor was efficient at discriminating subpopulation presenting different expression levels under stringent culture conditions. Plus, we showed that controlling growth kinetics had a stabilizing impact on plasmid expression levels, even under heterogeneous expression conditions.
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hal-03619298 , version 1 (22-07-2024)

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Catherine Boy, Julie Lesage, Sandrine Alfenore, Stéphane Guillouet, Nathalie Gorret. Study of plasmid-based expression level heterogeneity under plasmid-curing like conditions in Cupriavidus necator. Journal of Biotechnology, 2022, 345, pp.17-29. ⟨10.1016/j.jbiotec.2021.12.015⟩. ⟨hal-03619298⟩
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