Genotypic and tissue-specific variation of Populus nigra transcriptome profiles in response to drought - Archive ouverte HAL Access content directly
Journal Articles (Data Paper) Scientific Data Year : 2022

Genotypic and tissue-specific variation of Populus nigra transcriptome profiles in response to drought

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Abstract

Abstract Climate change is one of the most important challenges for mankind in the far and near future. In this regard, sustainable production of woody crops on marginal land with low water availability is a major challenge to tackle. This dataset is part of an experiment, in which we exposed three genetically differentiated genotypes of Populus nigra originating from contrasting natural habitats to gradually increasing moderate drought. RNA sequencing was performed on fine roots, developing xylem and leaves of those three genotypes under control and moderate drought conditions in order to get a comprehensive dataset on the transcriptional changes at the whole plant level under water limiting conditions. This dataset has already provided insight in the transcriptional control of saccharification potential of the three Populus genotypes under drought conditions and we suggest that our data will be valuable for further in-depth analysis regarding candidate gene identification or, on a bigger scale, for meta-transcriptome analysis.

Dates and versions

hal-03863446 , version 1 (21-11-2022)

Licence

Attribution - CC BY 4.0

Identifiers

Cite

Christian Eckert, Henning Wildhagen, Maria João Paulo, Simone Scalabrin, Johannes Ballauff, et al.. Genotypic and tissue-specific variation of Populus nigra transcriptome profiles in response to drought. Scientific Data , 2022, 9 (1), pp.297. ⟨10.1038/s41597-022-01417-z⟩. ⟨hal-03863446⟩
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