Modelling plant resistance deployment: the R package {landespi} - INRAE - Institut national de recherche pour l’agriculture, l’alimentation et l’environnement Accéder directement au contenu
Poster De Conférence Année : 2023

Modelling plant resistance deployment: the R package {landespi}

Résumé

Modelling plant resistance deployment: the R package {landespi} The R package {landsepi} provides a general modelling framework to help compare plant resistance deployment strategies and understand the impact of epidemiological, evolutionary and genetic factors for a wide range of pathosystems. The model is based on stochastic geometry for describing the landscape and the resistant hosts, a dispersal kernel for the dissemination of the pathogen, and a SEIR (Susceptible-Exposed-Infectious-Removed) architecture to simulate plant response to disease. The package includes a web interface, coded in R-Shiny, for pedagogical purposes.
Fichier principal
Vignette du fichier
Rimbaud et al 2023 - landsepi.pdf (184.32 Ko) Télécharger le fichier
Origine : Fichiers produits par l'(les) auteur(s)

Dates et versions

hal-04195689 , version 1 (04-09-2023)

Identifiants

  • HAL Id : hal-04195689 , version 1

Citer

Loup Rimbaud, Julien Papaïx, Jean-François Rey, Jean-Loup Gaussen, Marta Zaffaroni. Modelling plant resistance deployment: the R package {landespi}. 9. Rencontres R, Jun 2023, Avignon, France. ⟨hal-04195689⟩
11 Consultations
3 Téléchargements

Partager

Gmail Facebook X LinkedIn More