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Journal articles
FrameDP: sensitive peptide detection on noisy matured sequences
Abstract : Transcriptome sequencing represents a fundamental source of information for genome-wide studies and transcriptome analysis and will become increasingly important for expression analysis as new sequencing technologies takes over array technology. The identification of the protein-coding region in transcript sequences is a prerequisite for systematic amino acid-level analysis and more specifically for domain identification. In this article, we present FrameDP, a self-training integrative pipeline for predicting CDS in transcripts which can adapt itself to different levels of sequence qualities.
Keywords :
FrameDP
Cited literature [8 references]
https://hal.inrae.fr/hal-02665259
Contributor : Migration Prodinra Connect in order to contact the contributor
Submitted on : Sunday, May 31, 2020 - 6:25:00 AM
Last modification on : Tuesday, September 28, 2021 - 5:20:19 PM
Contributor : Migration Prodinra Connect in order to contact the contributor
Submitted on : Sunday, May 31, 2020 - 6:25:00 AM
Last modification on : Tuesday, September 28, 2021 - 5:20:19 PM
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