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Construction d’une base de données multi-utilisateurs pour améliorer la gestion des empreintes génétiques des variétés de pomme de terre produites en plants en France

Abstract : A set of SSR markers is routinely used in 5 French labs for identification of potato cultivars by their genetic fingerprint. Information on molecular profiles has to be exchanged interactively. An internet platform named IdeAle was designed by FN3PT IT department. Login and password are needed to access the platform (https). Data are encrypted and hosted in a professional French data center. The database is now containing the profiles of 939 varieties and 342 hybrids. Information concerning 30 markers is available: 7 of the kit in use in the seed certification labs and 23 markers used in the molecular description of the Inra collection. 551 alleles are represented and 1483 profiles were published. 10 new alleles were added to the previously known pannel routinely in use thanks to the analyses of the Inra varieties collection. Transferability of the markers to various revelation systems was evaluated.
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https://hal.inrae.fr/hal-02635046
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Submitted on : Wednesday, May 27, 2020 - 5:04:14 PM
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  • HAL Id : hal-02635046, version 1
  • PRODINRA : 344989

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Sylvie Marhadour, C. Dargier, Florence Esnault, N. Laversin, Amandine Mear, et al.. Construction d’une base de données multi-utilisateurs pour améliorer la gestion des empreintes génétiques des variétés de pomme de terre produites en plants en France. Innovations Agronomiques, INRAE, 2014, 35, pp.161-172. ⟨hal-02635046⟩

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