Losses of nutrients such as starch, lipids, proteins, iron and zinc as well as phytase activity and of recognised anti-nutritional compounds (some insoluble fibres, iron-binding phenolic compounds and phytates) were determined following abrasive decortication of grains from two pearl millet cultivars (Gampela and IKMP-5) with different omposition cultivated in Burkina Faso. In both ultivars, abrasion of the starchy endosperm started when about 12% of the dry matter had been removed from grains but lipid and protein losses followed the loss of dry matter. Zinc loss (%) was lower than that of iron; however, both were higher than dry matter losses. By contrast, phytate loss was lower than dry matter loss. Interestingly, decortication led to significant losses in fibres and iron-binding phenolic compounds with different level depending on the cultivar. Changes in phytase activity also differed in the two cultivars (42% and 11% losses of phytase activity in grains from Gampela and IKMP-5 cultivars, respectively, at 12% of abrasion). Hence, decortication of pearl millet grains does not decrease lipid and protein contents but does considerably decrease some anti-nutritional factors (part of the fibres and iron-binding phenolic compounds). However, as mineral contents and particularly iron content decreased while phytate content remains high, decortication may be insufficient to increase Fe and Zn bioavailability.