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Development of new SNPs loci on Quercus robur and Quercus petraea for genetic studies covering the whole species’ distribution range

Abstract : We used double digest restriction site associated DNA sequencing (ddRAD) to develop new geographically informative nuclear SNP loci inQuercus roburandQuercus petraea. Genotypes derived from sequence data of 95 individuals covering the distribution range of the species were analysed to select geographically informative and polymorphic loci within Russia and Germany. We successfully screened a selected set of 119 loci on a MassARRAY (R) iPLEX (TM) platform on 190 individuals from 19 locations in Russia. The newly developed loci will be useful for genetic studies over the whole distribution range of both species.
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https://hal.inrae.fr/hal-02929362
Contributor : Marion Desailly <>
Submitted on : Thursday, September 3, 2020 - 1:25:07 PM
Last modification on : Monday, March 29, 2021 - 2:46:57 PM

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Celine Blanc-Jolivet, Svetlana Bakhtina, Ruslan Yanbaev, Yulai Yanbaev, Malte Mader, et al.. Development of new SNPs loci on Quercus robur and Quercus petraea for genetic studies covering the whole species’ distribution range. Conservation Genetics Resources, Springer, In press, pp.1-4. ⟨10.1007/s12686-020-01141-z⟩. ⟨hal-02929362⟩

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