Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data - Archive ouverte HAL Access content directly
Journal Articles Genome Biology Year : 2018

Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data

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Michael Alaux
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  • PersonId : 1203737
Cyril Pommier
Nacer Mohellibi
Sophie Durand
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  • PersonId : 1203738
Erik Kimmel
  • Function : Author
  • PersonId : 1203744
Célia Michotey
Mathilde Lainé
  • Function : Author
Hadi Quesneville

Abstract

The Wheat@URGI portal has been developed to provide the international community of researchers and breeders with access to the bread wheat reference genome sequence produced by the International Wheat Genome Sequencing Consortium. Genome browsers, BLAST, and InterMine tools have been established for in-depth exploration of the genome sequence together with additional linked datasets including physical maps, sequence variations, gene expression, and genetic and phenomic data from other international collaborative projects already stored in the GnpIS information system. The portal provides enhanced search and browser features that will facilitate the deployment of the latest genomics resources in wheat improvement.
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Dates and versions

hal-02278879 , version 1 (26-05-2020)

Licence

Attribution - CC BY 4.0

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Michael Alaux, Jane Rogers, Thomas Letellier, Raphaël Flores, Françoise Alfama, et al.. Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data. Genome Biology, 2018, 19 (1), pp.905-911. ⟨10.1186/s13059-018-1491-4⟩. ⟨hal-02278879⟩
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