The IWGSC Data repository and wheat data resources hosted at URGI: Overview and perspectives - Archive ouverte HAL Access content directly
Conference Papers Year : 2018

The IWGSC Data repository and wheat data resources hosted at URGI: Overview and perspectives

(1) , (2) , (1) , (1) , (1) , (1) , (1) , (1) , (1) , (1) , (1) , (1) , (1) , (3) , (3) , (3) , (4) , (1) , (1)
1
2
3
4
Michael Alaux
  • Function : Author
  • PersonId : 1203737
Thomas Letellier
  • Function : Author
  • PersonId : 1203739
Cyril Pommier
Nacer Mohellibi
Sophie Durand
  • Function : Author
  • PersonId : 1203738
Erik Kimmel
  • Function : Author
  • PersonId : 1203744
Célia Michotey
Mikaël Loaec
  • Function : Author
  • PersonId : 1203746
Hadi Quesneville

Abstract

URGI is a genomics and bioinformatics research unit at INRA (French National institute for Agricultural Research) dedicated to plants and crop parasites. We develop and maintain a genomic and genetic Information System called GnpIS that manages multiple types of wheat data. Under the umbrella of the IWGSC (International Wheat Genome Sequencing Consortium), we have set up a Data Repository in the Wheat@URGI portal: http://wheat-urgi.versailles.inra.fr/Seq-Repository to store, browse and query the data being generated by the consortium and especially the wheat reference sequence (IWGSC RefSeq v1.0) and all related annotation data. We will give an overview of the wheat genomic, genetic and phenomic data available and suggest ways to develop the database in the future.
Fichier principal
Vignette du fichier
2018_Alaux_paper32082_1_1.pdf (1.18 Mo) Télécharger le fichier
Origin : Files produced by the author(s)
Loading...

Dates and versions

hal-02788401 , version 1 (05-06-2020)

Identifiers

  • HAL Id : hal-02788401 , version 1
  • PRODINRA : 433040

Cite

Michael Alaux, Jane Rogers, Thomas Letellier, Raphaël Flores, Cyril Pommier, et al.. The IWGSC Data repository and wheat data resources hosted at URGI: Overview and perspectives. PAG XXVI - Plant and Animal Genome Conference, Jan 2018, San Diego, United States. pp.32 slides. ⟨hal-02788401⟩
51 View
37 Download

Share

Gmail Facebook Twitter LinkedIn More