Correlative microscopy combining secondary ion mass spectrometry and electron microscopy: Comparison of intensity-hue-saturation and Laplacian pyramid methods for image fusion - INRAE - Institut national de recherche pour l’agriculture, l’alimentation et l’environnement
Article Dans Une Revue Analytical Chemistry Année : 2017

Correlative microscopy combining secondary ion mass spectrometry and electron microscopy: Comparison of intensity-hue-saturation and Laplacian pyramid methods for image fusion

Résumé

Correlative microscopy combining various imaging modalities offers powerful insights into obtaining a comprehensive understanding of physical, chemical, and biological phenomena. In this article, we investigate two approaches for image fusion in the context of combining the inherently lower-resolution chemical images obtained using secondary ion mass spectrometry (SIMS) with the high-resolution ultrastructural images obtained using electron microscopy (EM). We evaluate the image fusion methods with three different case studies selected to broadly represent the typical samples in life science research: (i) histology (unlabeled tissue), (ii) nanotoxicology, and (iii) metabolism (isotopically labeled tisue). We show that the intensity-hue-saturation fusion method often applied for EM-sharpening can result in serious image artifacts, especially in cases where different contrast mechanisms interplay. Here, we introduce and demonstrate Laplacian pyramid fusion as a powerful and more robust alternative method for image fusion. Both physical and technical aspects of correlative image overlay and image fusion specific to SIMS-based correlative microscopy are discussed in detail alongside the advantages, limitations, and the potential artifacts. Quantitative metrics to "evaluate the results of image fusion are also discussed.
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Dates et versions

hal-02622942 , version 1 (26-05-2020)

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Florian Vollnhals, Jean Nicolas Audinot, Tom Wirtz, Muriel Mercier-Bonin, Isabelle Fourquaux, et al.. Correlative microscopy combining secondary ion mass spectrometry and electron microscopy: Comparison of intensity-hue-saturation and Laplacian pyramid methods for image fusion. Analytical Chemistry, 2017, 89 (20), pp.10702-10710. ⟨10.1021/acs.analchem.7b01256⟩. ⟨hal-02622942⟩
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